C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA polymerase II associated protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023104 Rpap3-201 ENSMUSG00000022466 10090 - 15:97675105-97705822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000023104
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000023104 3.078±0.77 1.415±0.62 10.307±0.05 13.175±6.10 1.489±0.43 1.543±0.39 2.375±0.77 3.697±0.27 3.332±2.28 1.762±0.97 4.882±0.24 6.353±6.01 10.159±6.51 4.135±3.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YR CIL_0005YR_0002 CGP 15:97247107-97705822
CIL_0005YS CIL_0005YS_0002 CGP 15:97675105-97731405

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000005386 RPAP3-001 protein_coding Homo_sapiens 0 1461
ENST00000380650 RPAP3-003 protein_coding Homo_sapiens 0 994
ENST00000432584 RPAP3-002 protein_coding Homo_sapiens 0 1404
ENST00000547706 RPAP3-006 processed_transcript Homo_sapiens 0 241
ENST00000551293 RPAP3-004 retained_intron Homo_sapiens 0 254

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