C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aquarius intron-binding spliceosomal factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000156471 AQR-001 ENSG00000021776 9606 - 15:34851782-34969839 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000156471
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000156471 1.350±0.00 1.721±0.00 1.544±0.00 2.004±0.08 1.646±0.13 1.787±0.00 0.811±0.14 2.877±0.00 1.719±0.88 1.826±1.25 1.128±0.00 2.416±1.25 1.398±0.22 1.950±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VH CIL_0008VH_0001 VISTA 15:34591431-35191947
CIL_0006HF CIL_0006HF_0001 CGP 15:34788096-34969839
CIL_0006HG CIL_0006HG_0001 CGP 15:34851782-34988287

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 IC mRNA splicing, via spliceosome
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0016020 IDA membrane
GO:0044822 IDA poly(A) RNA binding
GO:0071013 IDA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043160 Aqr-001 protein_coding Mus_musculus 0 5025
ENSMUST00000102543 Aqr-004 protein_coding Mus_musculus 0 4759
ENSMUST00000125460 Aqr-005 processed_transcript Mus_musculus 0 1799
ENSMUST00000131785 Aqr-002 processed_transcript Mus_musculus 0 822
ENSMUST00000126701 Aqr-009 processed_transcript Mus_musculus 0 802
ENSMUST00000140441 Aqr-006 processed_transcript Mus_musculus 0 433

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