C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: makorin ring finger protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000170447 MKRN2-001 ENSG00000075975 9606 + 3:12557014-12583713 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000170447
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000170447 7.601±0.00 11.523±0.00 2.495±0.00 6.007±3.57 4.483±0.00 6.963±0.00 5.008±2.81 4.431±2.98 3.581±0.04 5.627±1.05 6.097±0.00 9.313±2.71 7.244±1.91 13.500±1.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SH CIL_0005SH_0001 CGP 3:12484432-12561059
CIL_0004KF CIL_0004KF_0001 CGP 3:12514934-12583713
CIL_0005SJ CIL_0005SJ_0001 CGP 3:12557014-12664226

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005622 IDA intracellular
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000449 Mkrn2-201 protein_coding Mus_musculus 0 1299
ENSMUST00000000451 Raf1-001 protein_coding Mus_musculus 0.0000000000002 82
ENSMUST00000112949 Raf1-003 protein_coding Mus_musculus 0.0000000000002 82
ENSMUST00000130528 Raf1-006 retained_intron Mus_musculus 0.0000000000002 82

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