C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000826_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs433 VISTA 9606 14:29972544-30574420
GeneTranscriptPositionBiotype
ENSG00000092140 (G2E3)
G2/M-phase specific E3 ubiquitin protein ligase 		ENST00000206595 (G2E3-001) 30559123-30620063 protein_coding
ENST00000438909 (G2E3-004) 30559158-30616669 protein_coding
ENST00000544007 (G2E3-003) 30559158-30607919 processed_transcript
ENST00000547532 (G2E3-012) 30577756-30593639 protein_coding
ENST00000547638 (G2E3-010) 30602747-30608002 processed_transcript
ENST00000548934 (G2E3-009) 30598558-30615515 nonsense_mediated_decay
ENST00000549159 (G2E3-005) 30611302-30618232 retained_intron
ENST00000549553 (G2E3-008) 30592323-30598288 processed_transcript
ENST00000550944 (G2E3-006) 30559158-30592447 protein_coding
ENST00000552488 (G2E3-007) 30559160-30590963 processed_transcript
ENST00000552515 (G2E3-011) 30593592-30605565 protein_coding
ENST00000553504 (G2E3-015) 30559310-30616672 protein_coding
ENST00000554714 (G2E3-014) 30574535-30593504 protein_coding
ENST00000555429 (G2E3-013) 30577761-30589484 protein_coding
ENSG00000184304 (PRKD1)
protein kinase D1 		ENST00000331968 (PRKD1-001) 29576481-29927742 protein_coding
ENST00000415220 (PRKD1-002) 29576942-29927642 protein_coding
ENST00000468370 (PRKD1-003) 29638296-29666158 retained_intron
ENST00000490795 (PRKD1-004) 29591115-29597668 nonsense_mediated_decay
ENST00000546371 (PRKD1-007) 29630572-29634474 protein_coding
ENST00000547441 (PRKD1-005) 29638523-29657844 processed_transcript
ENST00000549503 (PRKD1-008) 29663812-30191898 protein_coding
ENST00000551644 (PRKD1-006) 29636443-29650520 processed_transcript
ENST00000616995 (PRKD1-201) 29576479-29927512 protein_coding
ENST00000621126 (PRKD1-202) 29576479-29725678 protein_coding
ENSG00000240201 (RP11-269C4.1)
 ENST00000493565 (RP11-269C4.1-001) 30055210-30055954 processed_pseudogene
ENSG00000248975 (CTD-2251F13.1)
 ENST00000508469 (CTD-2251F13.1-001) 30167834-30297043 lincRNA
ENST00000548124 (CTD-2251F13.1-003) 29952397-29980254 lincRNA
ENST00000549360 (CTD-2251F13.1-002) 29972669-30297017 lincRNA
ENSG00000257904 (RP11-269C4.2)
 ENST00000553082 (RP11-269C4.2-001) 29940745-29980212 antisense
ENSG00000258350 (SYF2P1)
SYF2 pre-mRNA-splicing factor pseudogene 1 		ENST00000550658 (SYF2P1-001) 30541776-30542188 processed_pseudogene
ENSG00000279032 (RP11-306B9.1)
 ENST00000623159 (RP11-306B9.1-001) 30370108-30373115 TEC

Homo sapiens Ensembl (GRCh38)

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Transcripts
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CIL_000826_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs433 VISTA 10090 12:50701401-51303291
GeneTranscriptPositionBiotype
ENSMUSG00000046620 (Rps11-ps4)
ribosomal protein S11, pseudogene 4 		ENSMUST00000062226 (Rps11-ps4-001) 51297487-51297960 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000826_0001ENSG00000092140ENST00000206595ENST00000438909ENST00000544007ENST00000547532ENST00000547638ENST00000548934ENST00000549159ENST00000549553ENST00000550944ENST00000552488ENST00000552515ENST00000553504ENST00000554714ENST00000555429ENSG00000184304ENST00000331968ENST00000415220ENST00000468370ENST00000490795ENST00000546371ENST00000547441ENST00000549503ENST00000551644ENST00000616995ENST00000621126ENSG00000240201ENST00000493565ENSG00000248975ENST00000508469ENST00000548124ENST00000549360ENSG00000257904ENST00000553082ENSG00000258350ENST00000550658ENSG00000279032ENST00000623159CIL_000826_0002ENSMUSG00000046620ENSMUST00000062226
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000826_0001ENSG00000092140ENST00000206595ENST00000438909ENST00000547532ENST00000548934ENST00000549159ENST00000552488ENST00000552515ENST00000553504ENSG00000184304ENST00000331968ENST00000415220ENST00000490795ENST00000546371ENST00000616995ENST00000621126ENSG00000240201ENST00000493565ENSG00000248975ENST00000508469ENST00000549360ENSG00000257904ENST00000553082ENSG00000258350ENST00000550658ENSG00000279032ENST00000623159CIL_000826_0002ENSMUSG00000046620ENSMUST00000062226
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000092140 ENST00000206595 N/A 0.425±0.00 0.648±0.21 0.583±0.32 0.553±0.22 0.238±0.09 1.167±0.00 0.587±0.00 N/A 0.493±0.00 1.463±0.56 0.555±0.40 1.852±0.52
ENST00000438909 0.511±0.00 N/A 1.051±0.00 1.306±0.60 1.193±0.00 N/A 0.313±0.00 1.531±0.00 N/A 0.030±0.00 1.946±1.63 0.582±0.23 7.293±1.95
ENST00000544007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.812±0.00
ENST00000547638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548934 N/A N/A N/A N/A N/A N/A N/A 0.677±0.00 N/A 1.335±0.00 N/A N/A N/A
ENST00000549159 N/A N/A 0.382±0.00 N/A 0.569±0.17 0.237±0.00 N/A 0.101±0.00 0.329±0.00 0.193±0.00 1.182±0.00 N/A N/A
ENST00000549553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552488 N/A N/A N/A N/A N/A N/A N/A N/A 1.191±0.00 N/A N/A N/A N/A
ENST00000552515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.568±0.00
ENST00000553504 N/A N/A N/A N/A N/A N/A N/A N/A 0.381±0.00 N/A N/A N/A N/A
ENST00000554714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184304 ENST00000331968 N/A N/A N/A 0.582±0.00 0.628±0.44 0.614±0.00 1.072±0.00 N/A 0.297±0.00 0.170±0.00 4.306±3.12 0.514±0.01 N/A
ENST00000415220 0.394±0.00 N/A 0.866±0.23 N/A N/A 0.205±0.00 N/A 1.359±0.00 0.695±0.00 N/A 0.175±0.02 0.610±0.35 4.263±1.17
ENST00000468370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.945±0.00 N/A N/A
ENST00000546371 N/A N/A N/A N/A N/A N/A 1.894±0.00 N/A N/A 0.477±0.00 N/A N/A N/A
ENST00000547441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616995 1.855±0.00 N/A N/A 1.201±0.90 1.441±0.00 0.403±0.00 6.463±0.00 0.476±0.00 N/A N/A 0.695±0.00 0.330±0.00 4.247±0.00
ENST00000621126 N/A 2.315±0.00 1.203±0.00 N/A 0.563±0.00 N/A 0.079±0.00 N/A 0.900±0.00 0.160±0.00 1.134±0.90 1.078±0.00 1.509±0.00
ENSG00000240201 ENST00000493565 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248975 ENST00000508469 N/A N/A N/A N/A N/A 0.168±0.00 0.026±0.00 N/A N/A N/A N/A N/A 0.170±0.11
ENST00000548124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549360 0.021±0.00 0.516±0.00 0.373±0.00 0.199±0.00 0.300±0.00 0.198±0.00 0.065±0.00 0.057±0.00 0.079±0.00 N/A 0.037±0.01 N/A 0.157±0.00
ENSG00000257904 ENST00000553082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 0.060±0.00
ENSG00000258350 ENST00000550658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.141±0.00
ENSG00000279032 ENST00000623159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 0.009±0.00
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000046620 ENSMUST00000062226 N/A N/A 0.050±0.03 N/A N/A 0.103±0.00 0.166±0.06 0.084±0.06 0.281±0.00 N/A 0.117±0.00 0.016±0.00 0.116±0.00

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