C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTP binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216044 GTPBP1-001 ENSG00000100226 9606 + 22:38705723-38733587 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000216044
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000216044 19.850±0.00 14.061±0.00 12.231±9.86 8.371±5.18 9.249±6.18 1.161±0.00 1.999±0.00 19.098±16.82 13.506±11.56 13.910±6.91 13.570±2.87 16.315±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZY CIL_0001ZY_0001 CGP 22:38685543-38738299
CIL_0002XF CIL_0002XF_0001 CGP 22:38705723-38794143

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000177 ISS cytoplasmic exosome (RNase complex)
GO:0003924 ISS:IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005829 ISS cytosol
GO:0006184 ISS GTP catabolic process
GO:0006955 TAS immune response
GO:0007165 TAS signal transduction
GO:0016020 IDA membrane
GO:0044822 IDA poly(A) RNA binding
GO:0061014 ISS positive regulation of mRNA catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046463 Gtpbp1-201 protein_coding Mus_musculus 0 2800

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