C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synaptogyrin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216155 SYNGR1-006 ENSG00000100321 9606 + 22:39349949-39376033 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryENST00000216155
Transcript ID Kidney Ovary
ENST00000216155 1.321±0.00 1.560±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CB CIL_0000CB_0001 CGP 22:39312882-39385588
CIL_0000A3 CIL_0000A3_0001 CGP 22:39349925-39437060

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009728 Syngr1-002 protein_coding Mus_musculus 0 542
ENSMUST00000009727 Syngr1-001 protein_coding Mus_musculus 0 523
ENSMUST00000143928 Syngr1-003 protein_coding Mus_musculus 0 287

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