C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: bromodomain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216267 BRD1-002 ENSG00000100425 9606 - 22:49773283-49824804 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryENST00000216267
Transcript ID Breast Ovary
ENST00000216267 0.537±0.00 0.785±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IS CIL_0007IS_0001 CGP 22:49773283-49890078

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding
GO:0042393 IDA histone binding
GO:0043966 IDA histone H3 acetylation
GO:0070776 IDA MOZ/MORF histone acetyltransferase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109380 Brd1-002 protein_coding Mus_musculus 0 3912
ENSMUST00000088911 Brd1-003 protein_coding Mus_musculus 0 3155
ENSMUST00000109381 Brd1-001 protein_coding Mus_musculus 0 2992
ENSMUST00000156155 Brd1-004 processed_transcript Mus_musculus 0 569
ENSDART00000067828 BRPF1-201 protein_coding Danio_rerio 0 501
ENSDART00000125388 BRPF1-202 protein_coding Danio_rerio 0 448
ENSMUST00000139515 Brd1-006 processed_transcript Mus_musculus 0 351

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