C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 125, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000217740 RNF125-001 ENSG00000101695 9606 + 18:32018372-32073213 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000217740
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000217740 2.548±0.00 1.709±0.00 0.577±0.19 1.297±0.71 1.065±0.02 1.077±0.00 1.082±0.25 1.344±0.51 1.113±0.52 0.674±0.19 1.052±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FN CIL_0002FN_0002 CGP 18:31829173-32073213
CIL_0003X2 CIL_0003X2_0001 CGP 18:32018372-32131561

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0032480 TAS negative regulation of type I interferon production
GO:0045087 TAS innate immune response
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050004 Rnf125-201 protein_coding Mus_musculus 0 579

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