C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, metabotropic 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000231188 GRM6-201 ENSG00000113262 9606 - 5:178978327-178995123 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000231188
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000231188 0.095±0.00 0.206±0.00 0.083±0.03 0.114±0.01 0.038±0.00 0.063±0.02 0.230±0.00 0.049±0.02 0.053±0.00 0.025±0.00 0.048±0.02 0.014±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0001640 IEA adenylate cyclase inhibiting G-protein coupled glutamate receptor activity
GO:0001642 IBA group III metabotropic glutamate receptor activity
GO:0004930 TAS:IEA G-protein coupled receptor activity
GO:0005515 IPI protein binding
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0007165 IEA signal transduction
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007196 IBA adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway
GO:0007216 IMP G-protein coupled glutamate receptor signaling pathway
GO:0007268 IEA synaptic transmission
GO:0007626 IEA locomotory behavior
GO:0008066 IMP glutamate receptor activity
GO:0009584 TAS detection of visible light
GO:0016021 IEA integral component of membrane
GO:0035841 IEA new growing cell tip
GO:0042734 IBA presynaptic membrane
GO:0042803 IPI protein homodimerization activity
GO:0042995 IEA cell projection
GO:0050908 IMP detection of light stimulus involved in visual perception
GO:0050953 IEA sensory perception of light stimulus
GO:0051966 IBA regulation of synaptic transmission, glutamatergic
GO:0060041 IEA retina development in camera-type eye
GO:0090280 IMP positive regulation of calcium ion import

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171427 Grm6-201 protein_coding Mus_musculus 0 3064
ENSMUST00000000631 Grm6-001 protein_coding Mus_musculus 0 3064
ENSMUST00000126890 Grm6-003 processed_transcript Mus_musculus 0 1849
ENSMUST00000118161 Grm4-002 protein_coding Mus_musculus 0 1092
ENSDART00000013311 grm6a-201 protein_coding Danio_rerio 0 1068
ENSDART00000138993 grm6a-001 protein_coding Danio_rerio 0 1053
ENSMUST00000118489 Grm4-001 protein_coding Mus_musculus 0 976
ENSMUST00000156890 Grm6-002 processed_transcript Mus_musculus 0 551
ENSDART00000058736 grm4-201 protein_coding Danio_rerio 0 322
ENSDART00000012940 GRM2 (2 of 2)-201 protein_coding Danio_rerio 1e-23 117
ENSMUST00000004076 Grm3-201 protein_coding Mus_musculus 0.00000000000004 86
ENSMUST00000105560 Grm1-006 protein_coding Mus_musculus 0.0000000000005 82
ENSMUST00000044306 Grm1-002 protein_coding Mus_musculus 0.0000000000005 82
ENSMUST00000105561 Grm1-001 protein_coding Mus_musculus 0.0000000000005 82

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