C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: helicase (DNA) B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000247815 HELB-001 ENSG00000127311 9606 + 12:66302545-66347645 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000247815
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000247815 0.362±0.00 0.630±0.00 0.426±0.00 0.314±0.00 0.455±0.13 0.213±0.00 0.114±0.06 0.437±0.00 0.308±0.00 0.053±0.00 0.640±0.40 0.153±0.06 0.376±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004003 IEA ATP-dependent DNA helicase activity
GO:0005524 IEA ATP binding
GO:0005658 IDA alpha DNA polymerase:primase complex
GO:0006260 IMP DNA replication
GO:0006261 IEA DNA-dependent DNA replication
GO:0006269 IDA DNA replication, synthesis of RNA primer
GO:0017116 IDA single-stranded DNA-dependent ATP-dependent DNA helicase activity
GO:0032508 IEA DNA duplex unwinding
GO:0043141 IDA ATP-dependent 5'-3' DNA helicase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020449 Helb-001 protein_coding Mus_musculus 0 797
ENSMUST00000154501 Helb-002 nonsense_mediated_decay Mus_musculus 0 479
ENSMUST00000105262 Grip1-004 protein_coding Mus_musculus 0 316
ENSMUST00000041962 Grip1-003 protein_coding Mus_musculus 0 316
ENSMUST00000139352 Grip1-011 retained_intron Mus_musculus 0 311
ENSMUST00000105261 Grip1-014 protein_coding Mus_musculus 2e-24 121
ENSMUST00000023491 Lrch3-001 protein_coding Mus_musculus 0.0008 53

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