C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC42 effector protein (Rho GTPase binding) 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000053536 Cdc42ep4-001 ENSMUSG00000041598 10090 - 11:113726852-113751881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053536
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053536 29.145±5.72 87.339±13.85 8.767±0.69 17.039±11.53 23.203±4.85 21.075±3.65 4.314±0.95 7.118±0.57 8.917±1.79 40.509±10.82 1.661±0.54 23.241±7.34 17.791±2.18 6.222±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R4 CIL_0007R4_0002 VISTA 11:113433041-114034346
CIL_0008QM CIL_0008QM_0002 VISTA 11:113678008-114283381
CIL_00073C CIL_00073C_0002 CGP 11:113698172-113751881
CIL_0003AC CIL_0003AC_0003 CGP 11:113726850-114067046

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0007266 IDA Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249014 CDC42EP1-001 protein_coding Homo_sapiens 3e-16 92
ENST00000335793 CDC42EP4-001 protein_coding Homo_sapiens 0 959
ENST00000415670 CDC42EP1-004 protein_coding Homo_sapiens 0.000000000008 75
ENST00000430687 CDC42EP1-002 protein_coding Homo_sapiens 1e-16 92
ENST00000580315 CDC42EP4-006 protein_coding Homo_sapiens 0 490

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