C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: olfactomedin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000252854 OLFM1-001 ENSG00000130558 9606 + 9:135075520-135121178 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungMuscleOvaryTestisENST00000252854
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENST00000252854 0.339±0.00 86.084±0.00 0.332±0.00 2.450±1.88 1.212±1.15 0.573±0.00 2.240±0.00 1.779±0.00 0.373±0.06 0.702±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ET CIL_0001ET_0001 CGP 9:134905890-135121179

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0007399 TAS nervous system development
GO:0030054 IEA cell junction
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100244 Olfm1-201 protein_coding Mus_musculus 0 2423
ENSMUST00000113920 Olfm1-002 protein_coding Mus_musculus 0 2283
ENSMUST00000028177 Olfm1-001 protein_coding Mus_musculus 0 2211
ENSMUST00000152415 Olfm1-004 processed_transcript Mus_musculus 0 667
ENSMUST00000102879 Olfm1-003 protein_coding Mus_musculus 0 457

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