C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, receptor type, E
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000254667 PTPRE-003 ENSG00000132334 9606 + 10:127907061-128085855 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000254667
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000254667 1.988±0.00 4.053±0.00 3.984±0.12 0.902±0.00 0.756±0.06 1.806±1.28 0.838±0.00 0.182±0.00 1.936±0.95 1.539±1.21 0.584±0.00 0.756±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083E CIL_00083E_0001 VISTA 10:127865799-128466830
CIL_0001LJ CIL_0001LJ_0001 CGP 10:127877841-128085855
CIL_00028S CIL_00028S_0001 CGP 10:127907061-128126385

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005001 TAS transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006470 TAS:IEA protein dephosphorylation
GO:0007185 IEA transmembrane receptor protein tyrosine phosphatase signaling pathway
GO:0016021 IEA integral component of membrane
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0033003 IEA regulation of mast cell activation
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0042803 IEA protein homodimerization activity
GO:0046627 ISS negative regulation of insulin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073961 Ptpre-201 protein_coding Mus_musculus 0 2717
ENSDART00000111090 ptprh-201 protein_coding Danio_rerio 0.0000002 64
ENSDART00000131392 ptprh-001 protein_coding Danio_rerio 0.0000002 64

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