C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydroxysteroid (17-beta) dehydrogenase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000256216 HSD17B4-001 ENSG00000133835 9606 + 5:119452443-119542333 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000256216
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000256216 9.091±0.00 9.739±0.00 9.178±1.02 11.017±5.05 9.879±0.57 13.959±1.55 30.631±19.57 8.819±0.00 13.620±4.84 5.647±0.00 16.933±2.74 23.703±2.78 7.346±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LE CIL_0004LE_0001 CGP 5:119268692-119637199
CIL_0004B4 CIL_0004B4_0001 CGP 5:119452443-119637199

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IDA osteoblast differentiation
GO:0003857 IDA 3-hydroxyacyl-CoA dehydrogenase activity
GO:0005102 IPI receptor binding
GO:0005777 IDA peroxisome
GO:0005778 IDA peroxisomal membrane
GO:0005782 TAS peroxisomal matrix
GO:0006635 IDA fatty acid beta-oxidation
GO:0006699 TAS bile acid biosynthetic process
GO:0008152 IDA:IEA metabolic process
GO:0008206 TAS bile acid metabolic process
GO:0008209 IDA androgen metabolic process
GO:0008210 IDA estrogen metabolic process
GO:0016020 IDA membrane
GO:0016491 IEA oxidoreductase activity
GO:0016508 IDA long-chain-enoyl-CoA hydratase activity
GO:0016853 IEA isomerase activity
GO:0033540 TAS fatty acid beta-oxidation using acyl-CoA oxidase
GO:0033559 TAS unsaturated fatty acid metabolic process
GO:0033989 TAS 3alpha,7alpha,12alpha-trihydroxy-5beta-cholest-24-enoyl-CoA hydratase activity
GO:0036109 TAS alpha-linolenic acid metabolic process
GO:0036111 IDA very long-chain fatty-acyl-CoA metabolic process
GO:0036112 IDA medium-chain fatty-acyl-CoA metabolic process
GO:0042803 IDA protein homodimerization activity
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0044594 IDA 17-beta-hydroxysteroid dehydrogenase (NAD+) activity
GO:0055114 IEA:IDA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025385 Hsd17b4-001 protein_coding Mus_musculus 0 2342
ENSMUST00000139502 Hsd17b4-004 retained_intron Mus_musculus 0 357
ENSMUST00000127325 Hsd17b4-003 retained_intron Mus_musculus 0 252

Loading