C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004LE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000145779-ENSG00000133835 CGP 9606 5:119268692-119637199
GeneTranscriptPositionBiotype
ENSG00000133835 (HSD17B4)
hydroxysteroid (17-beta) dehydrogenase 4 		ENST00000256216 (HSD17B4-001) 119452443-119542333 protein_coding
ENST00000414835 (HSD17B4-004) 119452753-119542332 protein_coding
ENST00000442060 (HSD17B4-009) 119452497-119542332 nonsense_mediated_decay
ENST00000503168 (HSD17B4-013) 119452775-119478999 retained_intron
ENST00000503310 (HSD17B4-024) 119535770-119542252 retained_intron
ENST00000504811 (HSD17B4-003) 119452570-119542264 protein_coding
ENST00000505181 (HSD17B4-018) 119476448-119489283 processed_transcript
ENST00000507353 (HSD17B4-023) 119525736-119530100 retained_intron
ENST00000507695 (HSD17B4-016) 119456313-119475873 retained_intron
ENST00000508750 (HSD17B4-012) 119452766-119456732 retained_intron
ENST00000508788 (HSD17B4-019) 119476571-119478943 processed_transcript
ENST00000509514 (HSD17B4-006) 119476629-119542252 protein_coding
ENST00000509606 (HSD17B4-020) 119527158-119542332 retained_intron
ENST00000509951 (HSD17B4-011) 119525258-119542331 processed_transcript
ENST00000510025 (HSD17B4-005) 119452538-119542269 protein_coding
ENST00000511186 (HSD17B4-015) 119452473-119477489 retained_intron
ENST00000512029 (HSD17B4-022) 119496556-119499638 retained_intron
ENST00000512644 (HSD17B4-021) 119478832-119492124 retained_intron
ENST00000512841 (HSD17B4-025) 119452716-119478935 processed_transcript
ENST00000513628 (HSD17B4-007) 119476542-119542174 protein_coding
ENST00000515235 (HSD17B4-008) 119452516-119637199 retained_intron
ENST00000515320 (HSD17B4-002) 119452497-119542252 protein_coding
ENST00000518349 (HSD17B4-028) 119496541-119526024 processed_transcript
ENST00000519184 (HSD17B4-026) 119452565-119473980 processed_transcript
ENST00000520216 (HSD17B4-027) 119493818-119502080 processed_transcript
ENST00000520244 (HSD17B4-030) 119502049-119526009 processed_transcript
ENST00000522415 (HSD17B4-029) 119509141-119542016 processed_transcript
ENSG00000145779 (TNFAIP8)
tumor necrosis factor, alpha-induced protein 8 		ENST00000274456 (TNFAIP8-006) 119268692-119393394 protein_coding
ENST00000388882 (TNFAIP8-008) 119268754-119393084 protein_coding
ENST00000415806 (TNFAIP8-003) 119356035-119394599 protein_coding
ENST00000503646 (TNFAIP8-002) 119354773-119394598 protein_coding
ENST00000504642 (TNFAIP8-004) 119355313-119393446 protein_coding
ENST00000504771 (TNFAIP8-001) 119354314-119399688 protein_coding
ENST00000513374 (TNFAIP8-007) 119333175-119393743 protein_coding
ENSG00000213663 (CTD-2158P22.1)
 ENST00000487382 (CTD-2158P22.1-001) 119547131-119547606 processed_pseudogene
ENSG00000243333 (RN7SL174P)
RNA, 7SL, cytoplasmic 174, pseudogene 		ENST00000475578 (RN7SL174P-201) 119306343-119306631 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0004LE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062210-ENSMUSG00000024507 CGP 10090 18:49979427-50196269
GeneTranscriptPositionBiotype
ENSMUSG00000024507 (Hsd17b4)
hydroxysteroid (17-beta) dehydrogenase 4 		ENSMUST00000025385 (Hsd17b4-001) 50128201-50196269 protein_coding
ENSMUST00000127325 (Hsd17b4-003) 50191324-50195972 retained_intron
ENSMUST00000139502 (Hsd17b4-004) 50142369-50146569 retained_intron
ENSMUST00000152388 (Hsd17b4-002) 50128494-50142612 processed_transcript
ENSMUSG00000062210 (Tnfaip8)
tumor necrosis factor, alpha-induced protein 8 		ENSMUST00000087655 (Tnfaip8-011) 49979491-50051320 processed_transcript
ENSMUST00000124175 (Tnfaip8-005) 50031028-50046427 processed_transcript
ENSMUST00000126666 (Tnfaip8-002) 50019567-50090794 protein_coding
ENSMUST00000128377 (Tnfaip8-004) 50031029-50090686 protein_coding
ENSMUST00000134348 (Tnfaip8-007) 50051718-50090357 protein_coding
ENSMUST00000145726 (Tnfaip8-003) 50031018-50090851 protein_coding
ENSMUST00000148159 (Tnfaip8-001) 50053282-50091782 protein_coding
ENSMUST00000148989 (Tnfaip8-012) 49979427-50091001 protein_coding
ENSMUST00000153545 (Tnfaip8-009) 49979535-50107173 processed_transcript
ENSMUST00000153873 (Tnfaip8-008) 50051721-50090470 protein_coding
ENSMUST00000155403 (Tnfaip8-006) 50051710-50053415 retained_intron
ENSMUST00000179937 (Tnfaip8-010) 49979529-50093229 protein_coding
ENSMUST00000180305 (Tnfaip8-201) 50046740-50047152 protein_coding
ENSMUSG00000085939 (Cd63-ps)
CD63 antigen, pseudogene 		ENSMUST00000145417 (Cd63-ps-002) 50134726-50135600 processed_transcript
ENSMUST00000154992 (Cd63-ps-001) 50134795-50135511 transcribed_processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LE_0001ENSG00000133835ENST00000256216ENST00000414835ENST00000442060ENST00000503168ENST00000503310ENST00000504811ENST00000505181ENST00000507353ENST00000507695ENST00000508750ENST00000508788ENST00000509514ENST00000509606ENST00000509951ENST00000510025ENST00000511186ENST00000512029ENST00000512644ENST00000512841ENST00000513628ENST00000515235ENST00000515320ENST00000518349ENST00000519184ENST00000520216ENST00000520244ENST00000522415ENSG00000145779ENST00000274456ENST00000388882ENST00000415806ENST00000503646ENST00000504642ENST00000504771ENST00000513374ENSG00000213663ENST00000487382ENSG00000243333ENST00000475578CIL_0004LE_0002ENSMUSG00000024507ENSMUST00000025385ENSMUST00000127325ENSMUST00000139502ENSMUST00000152388ENSMUSG00000062210ENSMUST00000087655ENSMUST00000124175ENSMUST00000126666ENSMUST00000128377ENSMUST00000134348ENSMUST00000145726ENSMUST00000148159ENSMUST00000148989ENSMUST00000153545ENSMUST00000153873ENSMUST00000155403ENSMUST00000179937ENSMUST00000180305ENSMUSG00000085939ENSMUST00000145417ENSMUST00000154992
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004LE_0001ENSG00000133835ENST00000256216ENST00000414835ENST00000503168ENST00000509606ENST00000510025ENST00000512644ENST00000513628ENST00000515235ENST00000515320ENST00000522415ENSG00000145779ENST00000274456ENST00000415806ENST00000503646ENST00000504642ENST00000504771ENST00000513374ENSG00000213663ENST00000487382ENSG00000243333ENST00000475578CIL_0004LE_0002ENSMUSG00000024507ENSMUST00000025385ENSMUST00000152388ENSMUSG00000062210ENSMUST00000087655ENSMUST00000126666ENSMUST00000128377ENSMUST00000134348ENSMUST00000145726ENSMUST00000148159ENSMUST00000148989ENSMUST00000179937ENSMUSG00000085939ENSMUST00000145417ENSMUST00000154992
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133835 ENST00000256216 N/A 9.091±0.00 9.739±0.00 9.178±1.02 11.017±5.05 9.879±0.57 13.959±1.55 30.631±19.57 8.819±0.00 13.620±4.84 5.647±0.00 16.933±2.74 23.703±2.78 7.346±0.00
ENST00000414835 14.398±0.00 N/A N/A N/A 6.890±0.00 N/A 6.641±0.00 N/A N/A N/A N/A 5.897±0.00 N/A 11.798±0.00
ENST00000442060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503168 N/A N/A N/A 40.044±0.00 N/A N/A N/A N/A N/A N/A N/A 4.924±0.00 16.313±0.00 N/A
ENST00000503310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509606 N/A N/A N/A 18.382±0.00 N/A N/A N/A 26.846±0.00 67.561±0.00 N/A N/A 23.934±0.00 N/A N/A
ENST00000509951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510025 N/A N/A N/A N/A N/A N/A N/A N/A 4.156±0.00 N/A N/A N/A N/A 6.228±0.00
ENST00000511186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.275±0.00 N/A N/A N/A
ENST00000512841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513628 N/A N/A N/A 8.400±0.00 N/A N/A N/A N/A N/A N/A N/A 1.598±0.00 N/A N/A
ENST00000515235 N/A N/A N/A 2.439±0.00 N/A 2.119±0.00 N/A 6.567±0.00 2.863±0.00 N/A N/A N/A N/A N/A
ENST00000515320 28.060±0.00 10.615±0.00 N/A 16.852±0.00 19.392±0.00 11.476±0.00 20.843±0.00 28.308±0.00 54.639±0.00 13.794±0.00 6.064±0.65 3.003±0.00 N/A 14.784±8.23
ENST00000518349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522415 N/A N/A N/A 27.328±0.00 21.208±0.00 17.990±1.98 N/A 32.542±0.00 57.173±0.00 20.407±0.00 N/A 10.276±6.89 18.534±6.42 N/A
ENSG00000145779 ENST00000274456 N/A N/A N/A N/A N/A N/A N/A N/A 2.418±0.00 N/A N/A 1.088±0.00 N/A N/A
ENST00000388882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415806 10.869±0.00 15.701±0.00 N/A 0.922±0.00 11.363±0.00 3.222±0.00 1.039±0.62 2.070±1.84 0.964±0.40 4.499±2.67 0.252±0.17 1.672±0.81 13.425±9.04 3.230±1.68
ENST00000503646 N/A N/A 1.160±0.00 N/A 2.280±0.00 1.029±0.00 N/A N/A 0.768±0.00 N/A N/A 0.639±0.00 N/A N/A
ENST00000504642 N/A N/A 1.509±0.00 0.669±0.00 4.036±0.00 6.538±0.00 2.146±0.00 3.110±0.00 3.248±0.00 10.471±0.00 N/A 1.115±0.00 N/A N/A
ENST00000504771 N/A N/A 0.265±0.00 0.034±0.00 0.202±0.00 0.543±0.00 0.094±0.00 0.276±0.13 0.509±0.00 0.957±0.11 N/A 0.135±0.01 N/A 0.183±0.10
ENST00000513374 N/A N/A N/A 0.120±0.00 1.668±0.00 1.450±0.00 1.124±0.00 N/A N/A 4.552±0.00 N/A 0.574±0.00 N/A N/A
ENSG00000213663 ENST00000487382 N/A N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A N/A N/A 0.048±0.00 N/A
ENSG00000243333 ENST00000475578 0.404±0.00 0.145±0.00 N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024507 ENSMUST00000025385 33.288±9.75 21.348±2.30 19.744±0.83 15.684±3.77 18.412±3.44 9.709±0.95 16.280±0.75 34.420±5.33 37.542±22.16 23.237±2.48 14.784±1.04 22.002±16.15 45.176±18.55 7.495±1.52
ENSMUST00000127325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 40.270±0.00
ENSMUSG00000062210 ENSMUST00000087655 N/A N/A N/A 0.337±0.03 N/A N/A N/A N/A 0.058±0.01 N/A N/A 0.355±0.04 N/A 0.095±0.04
ENSMUST00000124175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126666 N/A 1.815±0.03 N/A N/A N/A N/A 16.988±3.46 N/A 0.382±0.05 N/A N/A 1.394±0.00 N/A N/A
ENSMUST00000128377 N/A 1.093±0.00 13.247±0.74 N/A 9.077±1.74 9.168±1.14 N/A N/A 2.019±1.66 4.021±0.69 1.498±0.00 3.604±1.06 N/A 0.390±0.08
ENSMUST00000134348 N/A 0.607±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.000±0.00 N/A N/A
ENSMUST00000145726 8.131±1.56 N/A N/A N/A 7.938±1.06 N/A N/A 129.494±20.92 1.095±0.00 5.483±1.75 0.748±0.00 4.848±1.59 N/A 0.625±0.00
ENSMUST00000148159 5.060±0.39 0.636±0.27 20.031±0.14 2.370±0.26 4.712±1.45 3.470±0.49 10.163±0.68 69.326±8.74 5.006±4.07 2.766±0.42 1.125±0.63 3.956±4.23 33.508±8.10 0.319±0.14
ENSMUST00000148989 15.405±3.40 2.489±1.32 16.074±0.33 2.535±0.56 12.751±3.26 23.410±3.34 9.009±1.25 N/A 5.476±4.55 3.686±1.31 0.478±0.10 2.909±1.80 N/A 0.561±0.16
ENSMUST00000153545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000179937 N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.01 N/A N/A 1.060±0.08 N/A 0.114±0.00
ENSMUST00000180305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085939 ENSMUST00000145417 4.106±1.42 N/A 0.220±0.00 0.158±0.05 1.600±0.61 1.552±1.16 0.480±0.17 5.381±2.08 0.125±0.04 1.011±0.15 N/A 3.372±2.83 0.201±0.05 0.167±0.08
ENSMUST00000154992 N/A 0.216±0.09 0.711±0.44 0.091±0.02 0.616±0.00 0.322±0.23 0.789±0.00 1.155±0.00 0.239±0.10 N/A 0.253±0.14 0.365±0.05 0.277±0.19 0.185±0.00

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