C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000257548 USP30-001 ENSG00000135093 9606 + 12:109052586-109088026 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000257548
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000257548 3.831±0.00 0.827±0.00 4.640±2.58 2.114±1.59 1.143±0.13 1.640±0.63 3.363±0.20 1.426±0.59 0.749±0.17 2.270±1.74 2.767±2.12 2.242±0.36 3.352±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VR CIL_0001VR_0001 CGP 12:108907741-109088026
CIL_0001VU CIL_0001VU_0001 CGP 12:109023089-109093631

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000422 IMP mitochondrion degradation
GO:0004197 IMP cysteine-type endopeptidase activity
GO:0004221 IDA ubiquitin thiolesterase activity
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IEA protein binding
GO:0005739 ISS mitochondrion
GO:0005741 IDA mitochondrial outer membrane
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008053 ISS mitochondrial fusion
GO:0008234 IEA cysteine-type peptidase activity
GO:0016021 IEA integral component of membrane
GO:0016579 IDA protein deubiquitination
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031588 Usp30-001 protein_coding Mus_musculus 0 1683

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