C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMYD family member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000258100 SMYD5-002 ENSG00000135632 9606 + 2:73214238-73223106 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000258100
Transcript ID Muscle
ENST00000258100 0.348±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RW CIL_0008RW_0001 VISTA 2:72647671-73248640
CIL_0003EF CIL_0003EF_0001 CGP 2:73202258-73227237
CIL_0003EK CIL_0003EK_0001 CGP 2:73214222-73233238

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045693 Smyd5-001 protein_coding Mus_musculus 0 719
ENSMUST00000152218 Smyd5-002 processed_transcript Mus_musculus 0 514

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