C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 260
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261556 TMEM260-001 ENSG00000070269 9606 + 14:56579793-56649515 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverLungOvaryPlacentaTestisENST00000261556
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENST00000261556 0.660±0.00 0.810±0.00 1.040±0.00 1.016±0.00 1.477±0.00 0.250±0.00 0.831±0.12 2.347±0.50 2.052±0.00 1.224±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000601 CIL_000601_0002 CGP 14:56117814-56650606
CIL_000602 CIL_000602_0002 CGP 14:56488354-56810479

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111735 Tmem260-001 protein_coding Mus_musculus 0 2067
ENSMUST00000124720 Tmem260-005 protein_coding Mus_musculus 0 1783
ENSMUST00000156480 Tmem260-003 retained_intron Mus_musculus 0 1731
ENSMUST00000133744 Tmem260-002 retained_intron Mus_musculus 0 1452
ENSMUST00000153765 Tmem260-004 nonsense_mediated_decay Mus_musculus 0 789

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