C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 138, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261593 RNF138-001 ENSG00000134758 9606 + 18:32091855-32131561 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261593
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261593 2.186±0.00 2.584±0.00 1.980±0.00 1.679±0.38 1.341±0.00 0.757±0.00 1.021±0.30 0.906±0.04 1.039±0.00 0.740±0.00 2.759±0.76 1.844±0.16 9.541±2.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003X2 CIL_0003X2_0001 CGP 18:32018372-32131561

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding
GO:0016055 IEA Wnt signaling pathway
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0019901 IPI protein kinase binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052396 Rnf138-201 protein_coding Mus_musculus 0 1218
ENSMUST00000072847 Rnf138-202 protein_coding Mus_musculus 0 832
ENSMUST00000122052 Gm12785-001 processed_pseudogene Mus_musculus 0 219

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