C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mahogunin ring finger 1, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262370 MGRN1-001 ENSG00000102858 9606 + 16:4624790-4690974 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262370
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262370 25.184±0.00 19.643±0.00 5.507±3.50 18.632±0.00 4.563±0.00 7.065±0.00 6.330±3.97 5.351±3.27 6.911±5.82 12.487±12.16 26.288±12.65 17.194±6.41 12.141±2.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IF CIL_0007IF_0002 CGP 16:4608883-4690974
CIL_00004Z CIL_00004Z_0001 CGP 16:4616493-4695859

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IEA protein polyubiquitination
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000070658 Mgrn1-202 protein_coding Mus_musculus 0 1351
ENSMUST00000023159 Mgrn1-201 protein_coding Mus_musculus 0 1336
ENSMUST00000106398 Rnf157-003 protein_coding Mus_musculus 0 455
ENSMUST00000100202 Rnf157-001 protein_coding Mus_musculus 0 455
ENSMUST00000141229 Rnf157-004 processed_transcript Mus_musculus 0 283
ENSMUST00000149147 Rnf157-002 protein_coding Mus_musculus 0 279

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