C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin related protein 2/3 complex, subunit 1A, 41kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262942 ARPC1A-001 ENSG00000241685 9606 + 7:99325910-99366257 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262942
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262942 53.239±0.00 13.768±0.00 47.730±12.35 38.167±12.02 40.900±11.19 35.868±23.40 38.098±17.72 26.913±8.51 42.434±19.32 34.565±0.00 94.670±31.12 88.915±6.03 83.432±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005L5 CIL_0005L5_0002 CGP 7:99325898-99394801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005829 TAS cytosol
GO:0005885 IEA Arp2/3 protein complex
GO:0015629 TAS:IEA actin cytoskeleton
GO:0030036 TAS actin cytoskeleton organization
GO:0030833 IEA regulation of actin filament polymerization
GO:0034314 IEA Arp2/3 complex-mediated actin nucleation
GO:0038096 TAS Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0045087 TAS innate immune response
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031625 Arpc1a-001 protein_coding Mus_musculus 0 1644
ENSMUST00000127694 Arpc1a-002 processed_transcript Mus_musculus 0 1031
ENSMUST00000142276 Arpc1a-006 retained_intron Mus_musculus 0 488
ENSMUST00000147564 Arpc1a-005 retained_intron Mus_musculus 0 189

Loading