C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor GTPase activating protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263245 ARFGAP3-001 ENSG00000242247 9606 - 22:42796502-42857402 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263245
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263245 12.602±0.00 8.183±0.00 7.346±3.12 8.627±0.08 9.404±2.55 5.154±2.49 17.357±9.91 7.399±1.55 17.091±7.08 7.459±4.36 15.587±6.29 12.273±0.77 22.273±0.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040L CIL_00040L_0001 CGP 22:42692121-42858106
CIL_0004U5 CIL_0004U5_0001 CGP 22:42796502-43015145

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005829 IDA cytosol
GO:0006886 NAS intracellular protein transport
GO:0008060 IDA:IEA ARF GTPase activator activity
GO:0008270 IEA zinc ion binding
GO:0008565 NAS protein transporter activity
GO:0009306 IEP protein secretion
GO:0016020 IDA membrane
GO:0016192 NAS vesicle-mediated transport
GO:0032312 IEA regulation of ARF GTPase activity
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067215 Arfgap3-201 protein_coding Mus_musculus 0 1142

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