C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, RAN-binding domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264159 ZRANB3-001 ENSG00000121988 9606 - 2:135199653-135531236 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000264159
Transcript ID Testis
ENST00000264159 2.816±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VQ CIL_0006VQ_0001 CGP 2:134964491-135176394
CIL_0006VP CIL_0006VP_0001 CGP 2:135052265-135531236
CIL_0003S4 CIL_0003S4_0002 CGP 2:135136916-135725270

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000733 IDA DNA strand renaturation
GO:0000737 IDA DNA catabolic process, endonucleolytic
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0004519 IEA endonuclease activity
GO:0004520 IDA endodeoxyribonuclease activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0006281 IDA DNA repair
GO:0006974 IDA cellular response to DNA damage stimulus
GO:0008270 IEA zinc ion binding
GO:0009411 IDA response to UV
GO:0016787 IEA hydrolase activity
GO:0031297 IDA replication fork processing
GO:0036292 IDA DNA rewinding
GO:0036310 IDA annealing helicase activity
GO:0043596 IDA nuclear replication fork
GO:0045910 IDA negative regulation of DNA recombination
GO:0048478 IDA replication fork protection
GO:0070530 IDA K63-linked polyubiquitin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112538 Zranb3-005 protein_coding Mus_musculus 0 2566
ENSMUST00000086614 Zranb3-001 protein_coding Mus_musculus 0 2566
ENSMUST00000097597 Zranb3-002 protein_coding Mus_musculus 0 1655

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