C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000272567 RP11-395L14.17-001 ENSG00000144158 9606 + 2:113657908-113658675 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLungOvaryPlacentaTestisENST00000272567
Transcript ID Adrenal Breast Kidney Lung Ovary Placenta Testis
ENST00000272567 0.019±0.00 0.019±0.00 0.020±0.00 0.018±0.00 0.062±0.00 0.057±0.00 0.056±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153609 Snrpa1-001 protein_coding Mus_musculus 0 1003
ENSMUST00000139082 Snrpa1-003 retained_intron Mus_musculus 0 595
ENSMUST00000032723 Snrpa1-002 nonsense_mediated_decay Mus_musculus 0 593
ENSMUST00000123157 Snrpa1-004 processed_transcript Mus_musculus 0 488

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