C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: centromere protein C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000273853 CENPC-001 ENSG00000145241 9606 - 4:67471803-67545606 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000273853
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000273853 0.757±0.00 1.027±0.00 0.432±0.00 1.237±0.00 1.299±0.97 0.585±0.00 0.645±0.08 1.648±1.46 1.209±0.98 1.868±0.92 0.226±0.03 1.315±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000M8 CIL_0000M8_0001 CGP 4:65319563-67545606
CIL_0000M7 CIL_0000M7_0001 CGP 4:67471803-67607337

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 IMP mitotic cell cycle
GO:0000776 IDA kinetochore
GO:0000780 IDA condensed nuclear chromosome, centromeric region
GO:0003677 TAS DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005721 IDA pericentric heterochromatin
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0007059 IMP chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0019237 IEA centromeric DNA binding
GO:0051382 IMP kinetochore assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031170 Cenpc1-201 protein_coding Mus_musculus 0 468

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