C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000M8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000145242-ENSG00000145241 CGP 9606 4:65319563-67545606
GeneTranscriptPositionBiotype
ENSG00000145241 (CENPC)
centromere protein C 		ENST00000273853 (CENPC-001) 67471803-67545606 protein_coding
ENST00000506410 (CENPC-007) 67512050-67514245 retained_intron
ENST00000506882 (CENPC-003) 67472482-67545483 nonsense_mediated_decay
ENST00000507196 (CENPC-008) 67505030-67508919 retained_intron
ENST00000510189 (CENPC-004) 67493405-67545503 retained_intron
ENST00000513216 (CENPC-006) 67472477-67530866 nonsense_mediated_decay
ENST00000515140 (CENPC-005) 67474692-67495201 nonsense_mediated_decay
ENSG00000145242 (EPHA5)
EPH receptor A5 		ENST00000273854 (EPHA5-001) 65319563-65670343 protein_coding
ENST00000354839 (EPHA5-002) 65323928-65669935 protein_coding
ENST00000432638 (EPHA5-003) 65323395-65670060 protein_coding
ENST00000511294 (EPHA5-004) 65330561-65670495 protein_coding
ENST00000613740 (EPHA5-201) 65319563-65670495 protein_coding
ENST00000622150 (EPHA5-202) 65319563-65670495 protein_coding
ENSG00000206629 (RNU1-63P)
RNA, U1 small nuclear 63, pseudogene 		ENST00000383902 (RNU1-63P-201) 67429591-67429754 snRNA
ENSG00000236562 (RP11-396M11.1)
 ENST00000505282 (RP11-396M11.1-001) 66094142-66094526 processed_pseudogene
ENSG00000243199 (RP11-408P14.1)
 ENST00000466377 (RP11-408P14.1-001) 65573459-65574328 processed_pseudogene
ENSG00000248479 (RP11-807H7.2)
 ENST00000503625 (RP11-807H7.2-001) 65702202-65705553 lincRNA
ENSG00000249413 (RP11-25H12.1)
 ENST00000508572 (RP11-25H12.1-001) 65998846-66150012 lincRNA
ENSG00000250030 (RP11-584P21.4)
 ENST00000508720 (RP11-584P21.4-001) 67446267-67446574 processed_pseudogene
ENSG00000250075 (RP11-584P21.2)
 ENST00000502400 (RP11-584P21.2-001) 67417305-67468251 lincRNA
ENST00000503987 (RP11-584P21.2-004) 67418542-67421054 lincRNA
ENST00000505155 (RP11-584P21.2-002) 67420759-67422000 lincRNA
ENSG00000251527 (RP11-51P8.1)
 ENST00000507344 (RP11-51P8.1-001) 65858761-65860204 lincRNA
ENSG00000272304 (RP11-19C24.1)
 ENST00000513540 (RP11-19C24.1-001) 66003281-66016792 lincRNA
ENSG00000274759 (5S_rRNA)
5S ribosomal RNA 		ENST00000611169 (5S_rRNA.1-223) 67439992-67440118 rRNA
CIL_0000M8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029245-ENSMUSG00000029253 CGP 10090 5:84057791-86065583
GeneTranscriptPositionBiotype
ENSMUSG00000029245 (Epha5)
Eph receptor A5 		ENSMUST00000053733 (Epha5-001) 84057791-84416921 protein_coding
ENSMUST00000113398 (Epha5-008) 84065512-84416806 protein_coding
ENSMUST00000113399 (Epha5-010) 84065512-84416806 protein_coding
ENSMUST00000113401 (Epha5-002) 84065512-84417359 protein_coding
ENSMUST00000113403 (Epha5-006) 84057791-84416806 protein_coding
ENSMUST00000113406 (Epha5-007) 84057791-84416806 protein_coding
ENSMUST00000136775 (Epha5-005) 84330775-84417382 retained_intron
ENSMUST00000152573 (Epha5-009) 84155867-84416921 retained_intron
ENSMUST00000154804 (Epha5-003) 84107038-84416921 retained_intron
ENSMUST00000155469 (Epha5-004) 84236417-84417382 retained_intron
ENSMUSG00000029253 (Cenpc1)
centromere protein C1 		ENSMUST00000031170 (Cenpc1-201) 86012043-86065583 protein_coding
ENSMUSG00000079067 (Hmgn2-ps1)
high mobility group nucleosomal binding domain 2, pseudogene 1 		ENSMUST00000120716 (Hmgn2-ps1-001) 84123313-84123591 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000M8_0001ENSG00000145241ENST00000273853ENST00000506410ENST00000506882ENST00000507196ENST00000510189ENST00000513216ENST00000515140ENSG00000145242ENST00000273854ENST00000354839ENST00000432638ENST00000511294ENST00000613740ENST00000622150ENSG00000206629ENST00000383902ENSG00000236562ENST00000505282ENSG00000243199ENST00000466377ENSG00000248479ENST00000503625ENSG00000249413ENST00000508572ENSG00000250030ENST00000508720ENSG00000250075ENST00000502400ENST00000503987ENST00000505155ENSG00000251527ENST00000507344ENSG00000272304ENST00000513540ENSG00000274759ENST00000611169CIL_0000M8_0002ENSMUSG00000029245ENSMUST00000053733ENSMUST00000113398ENSMUST00000113399ENSMUST00000113401ENSMUST00000113403ENSMUST00000113406ENSMUST00000136775ENSMUST00000152573ENSMUST00000154804ENSMUST00000155469ENSMUSG00000029253ENSMUST00000031170ENSMUSG00000079067ENSMUST00000120716
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000M8_0001ENSG00000145241ENST00000273853ENST00000506882ENST00000507196ENST00000510189ENST00000513216ENST00000515140ENSG00000145242ENST00000273854ENST00000354839ENST00000432638ENST00000511294ENST00000613740ENST00000622150ENSG00000206629ENST00000383902ENSG00000236562ENST00000505282ENSG00000243199ENST00000466377ENSG00000248479ENST00000503625ENSG00000249413ENST00000508572ENSG00000250030ENST00000508720ENSG00000250075ENST00000502400ENST00000503987ENST00000505155ENSG00000251527ENST00000507344ENSG00000272304ENST00000513540ENSG00000274759ENST00000611169CIL_0000M8_0002ENSMUSG00000029245ENSMUST00000053733ENSMUST00000113398ENSMUST00000113399ENSMUST00000113401ENSMUST00000113403ENSMUST00000113406ENSMUST00000136775ENSMUST00000154804ENSMUSG00000029253ENSMUST00000031170ENSMUSG00000079067ENSMUST00000120716
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145241 ENST00000273853 0.757±0.00 1.027±0.00 N/A 0.432±0.00 1.237±0.00 1.299±0.97 0.585±0.00 0.645±0.08 1.648±1.46 1.209±0.98 N/A 1.868±0.92 0.226±0.03 1.315±0.33
ENST00000506410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506882 0.519±0.00 1.493±0.00 0.681±0.00 0.656±0.00 1.093±0.00 1.068±0.00 N/A N/A 0.105±0.00 2.188±0.00 N/A 1.110±0.00 0.263±0.08 1.086±0.00
ENST00000507196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.820±0.00 N/A N/A N/A
ENST00000510189 N/A N/A N/A N/A 1.453±0.00 1.565±0.00 0.836±0.00 1.177±0.00 1.592±0.00 2.405±0.00 N/A 1.568±0.44 0.288±0.00 2.504±0.00
ENST00000513216 0.755±0.00 1.943±0.00 N/A N/A 0.633±0.00 1.507±0.00 0.745±0.06 0.986±0.00 0.327±0.00 0.757±0.00 N/A 1.692±0.00 0.428±0.20 1.926±0.08
ENST00000515140 N/A N/A N/A N/A N/A N/A N/A N/A 0.537±0.00 N/A 0.558±0.00 1.532±0.00 N/A N/A
ENSG00000145242 ENST00000273854 N/A 0.007±0.00 N/A 1.379±0.19 0.009±0.00 N/A 0.033±0.00 N/A N/A N/A 0.029±0.00 0.063±0.00 0.014±0.01 0.050±0.00
ENST00000354839 0.025±0.00 0.009±0.00 N/A 1.337±0.00 N/A N/A N/A N/A 0.239±0.00 0.032±0.00 N/A N/A 0.033±0.00 0.507±0.00
ENST00000432638 N/A N/A N/A N/A 0.046±0.03 0.057±0.00 0.011±0.00 N/A 0.110±0.00 0.037±0.00 N/A 0.112±0.00 N/A 0.122±0.00
ENST00000511294 0.006±0.00 N/A N/A 4.339±0.00 0.021±0.00 N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A
ENST00000613740 N/A 0.010±0.00 N/A 0.832±0.00 0.010±0.00 N/A 0.009±0.00 N/A 0.098±0.00 N/A N/A 0.071±0.05 0.009±0.01 0.087±0.04
ENST00000622150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.193±0.00 N/A N/A
ENSG00000206629 ENST00000383902 N/A N/A N/A 0.114±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236562 ENST00000505282 0.517±0.00 0.204±0.00 N/A 0.081±0.00 0.225±0.00 0.068±0.00 N/A 0.576±0.00 0.547±0.00 0.523±0.00 0.115±0.00 0.136±0.00 N/A 0.064±0.00
ENSG00000243199 ENST00000466377 1.159±0.00 2.133±0.00 N/A 0.264±0.03 0.591±0.55 1.467±0.00 0.219±0.00 0.895±0.85 0.263±0.17 1.145±0.00 0.260±0.00 0.280±0.28 0.333±0.17 0.513±0.46
ENSG00000248479 ENST00000503625 N/A 0.026±0.00 N/A 1.011±0.81 N/A N/A 0.668±0.00 N/A N/A N/A N/A 0.296±0.00 N/A 0.098±0.00
ENSG00000249413 ENST00000508572 0.023±0.00 0.023±0.00 N/A 0.126±0.00 0.047±0.00 N/A 0.062±0.00 0.023±0.00 0.060±0.00 N/A N/A N/A 0.346±0.21 0.166±0.00
ENSG00000250030 ENST00000508720 N/A 0.041±0.00 N/A 0.040±0.00 N/A 0.240±0.00 N/A N/A 0.636±0.00 N/A N/A N/A N/A 0.080±0.00
ENSG00000250075 ENST00000502400 0.028±0.00 N/A N/A N/A N/A N/A N/A 0.056±0.00 N/A N/A N/A 0.009±0.00 N/A 0.447±0.05
ENST00000503987 0.016±0.00 0.582±0.00 N/A 0.621±0.00 0.099±0.00 0.250±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505155 N/A N/A N/A N/A 0.072±0.00 N/A N/A 0.126±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000251527 ENST00000507344 N/A 0.093±0.00 N/A 0.128±0.09 0.064±0.00 0.021±0.00 0.033±0.00 0.022±0.00 N/A 0.046±0.00 N/A N/A N/A 0.050±0.02
ENSG00000272304 ENST00000513540 N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A 0.175±0.10
ENSG00000274759 ENST00000611169 0.469±0.00 1.492±0.00 N/A 9.548±8.96 0.664±0.00 47.165±0.00 0.435±0.00 0.904±0.00 0.305±0.00 0.552±0.00 37.083±0.00 8.422±0.00 N/A 0.109±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029245 ENSMUST00000053733 N/A N/A N/A 3.883±0.00 N/A N/A N/A N/A N/A N/A N/A 0.137±0.01 N/A 0.016±0.00
ENSMUST00000113398 0.045±0.02 N/A N/A 5.725±0.00 0.112±0.04 N/A 0.071±0.02 0.020±0.00 0.063±0.03 0.031±0.00 0.020±0.01 0.209±0.00 0.036±0.02 0.201±0.17
ENSMUST00000113399 N/A N/A 0.014±0.00 5.910±0.36 0.103±0.00 N/A N/A 0.062±0.01 0.036±0.00 0.142±0.02 N/A 0.241±0.00 0.025±0.00 N/A
ENSMUST00000113401 N/A 0.284±0.00 0.046±0.03 3.673±1.40 N/A 0.077±0.04 0.079±0.00 0.040±0.03 0.058±0.05 0.038±0.00 N/A 0.848±0.49 0.013±0.00 0.067±0.02
ENSMUST00000113403 N/A N/A N/A 3.873±0.00 N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A
ENSMUST00000113406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00 N/A N/A
ENSMUST00000136775 N/A 1.583±0.77 N/A 4.549±0.00 0.061±0.00 0.185±0.09 N/A 0.013±0.00 N/A 0.072±0.03 N/A 0.437±0.09 N/A N/A
ENSMUST00000152573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154804 N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A 0.011±0.00 N/A
ENSMUST00000155469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029253 ENSMUST00000031170 1.661±0.97 4.181±2.04 3.719±0.71 4.320±2.47 0.808±0.75 1.778±0.74 0.403±0.02 0.638±0.32 2.406±2.16 0.804±0.22 0.824±0.19 3.379±1.09 4.178±1.32 4.072±1.30
ENSMUSG00000079067 ENSMUST00000120716 1.010±0.19 N/A N/A 0.029±0.00 N/A 0.717±0.00 N/A 0.631±0.29 0.157±0.02 0.827±0.26 0.286±0.00 N/A N/A 0.330±0.00

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