C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: density-regulated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000280557 DENR-001 ENSG00000139726 9606 + 12:122752774-122771064 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000280557
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000280557 8.232±0.00 5.961±0.00 4.005±0.00 7.529±1.74 5.863±4.79 5.576±2.01 3.985±0.57 5.188±4.20 5.427±2.87 3.606±0.92 2.221±0.64 11.590±2.28 11.074±2.07 7.388±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PG CIL_0002PG_0001 CGP 12:122726076-122771064
CIL_0002P9 CIL_0002P9_0001 CGP 12:122752774-122827528

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001731 IDA formation of translation preinitiation complex
GO:0002192 IDA IRES-dependent translational initiation
GO:0003674 ND molecular_function
GO:0003743 IEA translation initiation factor activity
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0006413 IEA translational initiation
GO:0032790 IDA ribosome disassembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023869 Denr-001 protein_coding Mus_musculus 0 959
ENSMUST00000166233 Denr-002 protein_coding Mus_musculus 0 776

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