C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase long-chain family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000281455 ACSL1-001 ENSG00000151726 9606 - 4:184755601-184826094 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000281455
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000281455 98.619±0.00 3.997±0.00 1.897±0.00 8.179±0.00 119.664±115.71 5.748±2.52 47.374±39.87 45.710±11.61 121.064±111.83 12.786±0.00 38.921±32.32 4.134±2.29 3.750±1.30 4.671±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z8 CIL_0000Z8_0002 CGP 4:184755595-185020804

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001676 IDA long-chain fatty acid metabolic process
GO:0003824 IEA catalytic activity
GO:0004467 IDA long-chain fatty acid-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005741 TAS mitochondrial outer membrane
GO:0005789 TAS endoplasmic reticulum membrane
GO:0008152 IEA metabolic process
GO:0008610 IDA lipid biosynthetic process
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019432 TAS triglyceride biosynthetic process
GO:0033559 TAS unsaturated fatty acid metabolic process
GO:0035338 TAS long-chain fatty-acyl-CoA biosynthetic process
GO:0036109 TAS alpha-linolenic acid metabolic process
GO:0043651 TAS linoleic acid metabolic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0044539 IDA long-chain fatty acid import

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034046 Acsl1-001 protein_coding Mus_musculus 0 2514
ENSMUST00000110372 Acsl1-002 protein_coding Mus_musculus 0 2447
ENSMUST00000110371 Acsl1-005 protein_coding Mus_musculus 0 2091
ENSMUST00000128746 Acsl1-003 retained_intron Mus_musculus 0 507
ENSMUST00000152423 Acsl1-004 protein_coding Mus_musculus 0 425
ENSMUST00000135955 Acsl1-007 protein_coding Mus_musculus 0 387
ENSMUST00000130563 Acsl1-006 protein_coding Mus_musculus 0 250

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