C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SAM domain, SH3 domain and nuclear localization signals 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000285670 SAMSN1-001 ENSG00000155307 9606 - 21:14485228-14583402 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000285670
Transcript ID Testis
ENST00000285670 0.058±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MS CIL_0000MS_0002 CGP 21:14371115-14583402

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001784 IDA phosphotyrosine binding
GO:0002820 ISS negative regulation of adaptive immune response
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005829 IEA cytosol
GO:0042995 IEA cell projection
GO:0044822 IDA poly(A) RNA binding
GO:0050732 ISS negative regulation of peptidyl-tyrosine phosphorylation
GO:0050869 ISS negative regulation of B cell activation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114240 Samsn1-001 protein_coding Mus_musculus 0 1009
ENSMUST00000114239 Samsn1-003 protein_coding Mus_musculus 0 981
ENSMUST00000147447 Samsn1-006 retained_intron Mus_musculus 0 233
ENSMUST00000139691 Samsn1-004 retained_intron Mus_musculus 0 233

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