C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAM domain, SH3 domain and nuclear localization signals, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147447 Samsn1-006 ENSMUSG00000022876 10090 - 16:75883623-75909310 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaENSMUST00000147447
Transcript ID Muscle Ovary Placenta
ENSMUST00000147447 0.150±0.00 0.282±0.00 0.101±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MS CIL_0000MS_0003 CGP 16:75755190-76022270
CIL_00031Y CIL_00031Y_0002 CGP 16:75858793-76373827

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285670 SAMSN1-001 protein_coding Homo_sapiens 0 233
ENST00000400566 SAMSN1-002 protein_coding Homo_sapiens 0 351
ENST00000619120 SAMSN1-201 protein_coding Homo_sapiens 0 235

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