C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135387 Trim24-008 ENSMUSG00000029833 10090 + 6:37948559-37953630 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLungOvaryENSMUST00000135387
Transcript ID Adipose Brain Breast Heart Kidney Lung Ovary
ENSMUST00000135387 4.834±0.66 9.681±0.00 4.999±1.44 2.662±0.35 4.043±0.00 2.481±0.16 5.094±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Q4 CIL_0002Q4_0002 CGP 6:37530173-37966296
CIL_0002Q3 CIL_0002Q3_0002 CGP 6:37870811-38046996

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261890 RAB11A-001 protein_coding Homo_sapiens 0.00000004 66
ENST00000287957 GATAD1-001 protein_coding Homo_sapiens 0.000000002 69
ENST00000343526 TRIM24-001 protein_coding Homo_sapiens 0 497
ENST00000394807 ZBTB3-001 protein_coding Homo_sapiens 0.00002 57
ENST00000401725 AC019109.1-001 processed_pseudogene Homo_sapiens 0.00000000009 73
ENST00000415680 TRIM24-007 protein_coding Homo_sapiens 0 497
ENST00000480612 LCA5L-011 retained_intron Homo_sapiens 0.00000000001 75
ENST00000493595 TRIM24-012 processed_transcript Homo_sapiens 0 496
ENST00000497516 TRIM24-014 processed_transcript Homo_sapiens 0 224
ENST00000523988 SLC25A30-004 retained_intron Homo_sapiens 0.00000000002 77
ENST00000549743 KMT2D-005 processed_transcript Homo_sapiens 0.0000000001 71
ENST00000555661 PTGR2-001 protein_coding Homo_sapiens 0.0000001 64
ENST00000578223 PER1-011 retained_intron Homo_sapiens 0.000000000003 77
ENST00000601372 ZNF558-001 protein_coding Homo_sapiens 0.000003 60
ENST00000620194 TRIM24-201 protein_coding Homo_sapiens 0 497

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