C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphate cytidylyltransferase 1, choline, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000292823 PCYT1A-001 ENSG00000161217 9606 - 3:196234368-196287713 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyLiverOvaryPlacentaTestisENST00000292823
Transcript ID Adrenal Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENST00000292823 2.049±0.00 1.922±0.00 4.545±0.62 5.547±4.48 2.548±0.00 2.632±1.34 4.872±1.57 8.583±0.00 8.710±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QR CIL_0008QR_0001 VISTA 3:195819501-196421470

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004105 ISS choline-phosphate cytidylyltransferase activity
GO:0005515 IEA protein binding
GO:0005789 ISS endoplasmic reticulum membrane
GO:0006644 TAS phospholipid metabolic process
GO:0006656 ISS phosphatidylcholine biosynthetic process
GO:0006657 ISS CDP-choline pathway
GO:0008289 IEA lipid binding
GO:0009058 IEA biosynthetic process
GO:0042587 ISS glycogen granule
GO:0042803 IEA protein homodimerization activity
GO:0044281 TAS small molecule metabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079791 Pcyt1a-001 protein_coding Mus_musculus 0 2030
ENSMUST00000104893 Pcyt1a-201 protein_coding Mus_musculus 0 2026
ENSMUST00000115140 Pcyt1a-003 protein_coding Mus_musculus 0 1786
ENSMUST00000115137 Pcyt1a-002 protein_coding Mus_musculus 0 990
ENSMUST00000141772 Pcyt1a-006 retained_intron Mus_musculus 0 294
ENSMUST00000123199 Pcyt1a-004 retained_intron Mus_musculus 0 289

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