C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | synaptic Ras GTPase activating protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000293748  |
SYNGAP1-004 |
ENSG00000197283 |
9606 | + |
6:33420310-33452395  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000253 | CIL_000253_0001 | CGP | 6:33416442-33453689 |
| CIL_000254 | CIL_000254_0001 | CGP | 6:33420070-33457548 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0005622 | IEA | intracellular |
| GO:0007165 | IEA | signal transduction |
| GO:0032318 | IEA | regulation of Ras GTPase activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000177932
|
Syngap1-202 | protein_coding | Mus_musculus | 0 | 5326 |
|
ENSMUST00000081285
|
Syngap1-201 | protein_coding | Mus_musculus | 0 | 4922 |
|
ENSDART00000093368
|
SYNGAP1 (1 of 2)-201 | protein_coding | Danio_rerio | 0 | 632 |
|
ENSDART00000137880
|
SYNGAP1 (1 of 2)-001 | protein_coding | Danio_rerio | 0 | 632 |
