C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC42 effector protein (Rho GTPase binding) 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295324 CDC42EP3-001 ENSG00000163171 9606 - 2:37641889-37672191 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295324
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295324 21.593±0.00 5.097±0.00 0.783±0.00 0.921±0.40 3.849±0.28 4.127±2.47 6.672±3.61 3.442±3.16 5.975±5.74 7.345±4.84 5.358±3.98 5.526±2.79 4.302±0.35 4.901±3.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085G CIL_00085G_0001 VISTA 2:37116727-37718317
CIL_0008VK CIL_0008VK_0001 VISTA 2:37223010-37826535
CIL_0002IM CIL_0002IM_0001 CGP 2:37344574-37738468
CIL_0002IP CIL_0002IP_0001 CGP 2:37641882-38067142

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005519 TAS cytoskeletal regulatory protein binding
GO:0005737 IEA cytoplasm
GO:0007165 TAS signal transduction
GO:0008360 IEA regulation of cell shape
GO:0015629 IDA actin cytoskeleton
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068958 Cdc42ep3-201 protein_coding Mus_musculus 0 976

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