C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L10-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000298283 RPL10L-001 ENSG00000165496 9606 - 14:46651010-46651821 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonLungMuscleOvaryTestisENST00000298283
Transcript ID Adipose Adrenal Brain Colon Lung Muscle Ovary Testis
ENST00000298283 0.071±0.00 0.075±0.00 0.028±0.00 0.141±0.08 0.352±0.00 0.088±0.00 0.032±0.00 44.888±1.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046T CIL_00046T_0001 CGP 14:46651010-47674954

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005840 IEA ribosome
GO:0005844 IEA polysome
GO:0006412 IEA translation
GO:0007283 IEP spermatogenesis
GO:0016020 IDA membrane
GO:0022625 NAS cytosolic large ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074085 Rpl10-002 protein_coding Mus_musculus 0 706
ENSMUST00000008826 Rpl10-001 protein_coding Mus_musculus 0 706
ENSMUST00000076364 Rpl10-ps3-201 protein_coding Mus_musculus 0 706
ENSMUST00000119438 Rpl10-ps1-001 transcribed_processed_pseudogene Mus_musculus 0 699
ENSMUST00000121321 Rpl10-ps6-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000151702 Rpl10-003 protein_coding Mus_musculus 0 689
ENSMUST00000076465 Gm5621-201 processed_pseudogene Mus_musculus 0 649
ENSMUST00000187303 RP23-435I22.2-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000081908 Rpl10l-001 protein_coding Mus_musculus 0 645
ENSMUST00000098432 Rpl10-ps2-201 processed_pseudogene Mus_musculus 0 621
ENSMUST00000121511 Gm14460-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000134330 Rpl10-009 retained_intron Mus_musculus 0 564
ENSMUST00000075377 Gm6564-201 processed_pseudogene Mus_musculus 0 560
ENSMUST00000125775 Rpl10-005 retained_intron Mus_musculus 0 492
ENSMUST00000149171 Rpl10-004 processed_transcript Mus_musculus 0 492
ENSMUST00000135690 Rpl10-011 protein_coding Mus_musculus 0 399
ENSMUST00000138954 Rpl10-006 retained_intron Mus_musculus 0 305
ENSMUST00000146584 Rpl10-010 retained_intron Mus_musculus 0 278
ENSMUST00000142142 Rpl10-007 retained_intron Mus_musculus 0 257
ENSMUST00000144434 Rpl10-008 retained_intron Mus_musculus 0 200

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