C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L10, pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076364 Rpl10-ps3-201 ENSMUSG00000058443 10090 - 9:50344240-50344981 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076364
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076364 2.678±1.43 0.902±0.26 26.822±4.39 69.158±0.00 1.496±0.70 2.060±1.19 1.035±0.28 3.365±0.84 36.685±48.94 1.805±0.55 2.991±1.09 2.153±1.14 15.056±16.48 0.404±0.25

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298283 RPL10L-001 protein_coding Homo_sapiens 0 706
ENST00000310599 RP11-209A2.1-001 processed_pseudogene Homo_sapiens 0 697
ENST00000325000 CTD-2192J16.15-001 processed_pseudogene Homo_sapiens 0 843
ENST00000344746 RPL10-001 protein_coding Homo_sapiens 0 867
ENST00000369817 RPL10-008 protein_coding Homo_sapiens 0 869
ENST00000406022 RPL10-011 protein_coding Homo_sapiens 0 821
ENST00000412093 RP11-465N4.2-001 processed_pseudogene Homo_sapiens 0 335
ENST00000424325 RPL10-201 protein_coding Homo_sapiens 0 869
ENST00000427342 RP11-254B13.4-001 processed_pseudogene Homo_sapiens 0 372
ENST00000427682 RPL10-018 protein_coding Homo_sapiens 0 316
ENST00000427719 AC010095.7-001 processed_pseudogene Homo_sapiens 0 676
ENST00000428169 RPL10-020 protein_coding Homo_sapiens 0 316
ENST00000431607 RPL10P3-001 processed_pseudogene Homo_sapiens 0 409
ENST00000436473 RPL10-015 protein_coding Homo_sapiens 0 811
ENST00000447844 RPL10P1-001 processed_pseudogene Homo_sapiens 0 702
ENST00000449494 RPL10-019 protein_coding Homo_sapiens 2e-17 94
ENST00000451365 RPL10-017 protein_coding Homo_sapiens 0 346
ENST00000457497 AC016708.2-001 processed_pseudogene Homo_sapiens 0 416
ENST00000458500 RPL10-009 protein_coding Homo_sapiens 0 438
ENST00000467168 RPL10-012 retained_intron Homo_sapiens 0 658
ENST00000474786 RPL10-004 retained_intron Homo_sapiens 0 440
ENST00000482732 RPL10-003 retained_intron Homo_sapiens 0 211
ENST00000485196 RPL10-010 retained_intron Homo_sapiens 0 680
ENST00000489200 RPL10-006 retained_intron Homo_sapiens 0 300
ENST00000491035 RPL10-005 retained_intron Homo_sapiens 0 438
ENST00000492572 RPL10-013 retained_intron Homo_sapiens 0 438
ENST00000495649 RP11-190C22.1-001 processed_pseudogene Homo_sapiens 0 580
ENST00000509131 CTC-431G16.3-001 processed_pseudogene Homo_sapiens 0 198
ENST00000514065 CTC-498M16.3-001 processed_pseudogene Homo_sapiens 0 235
ENST00000522551 CTC-575D19.1-001 processed_pseudogene Homo_sapiens 0 832
ENST00000522888 RP11-546B8.5-001 processed_pseudogene Homo_sapiens 0 381
ENST00000550757 RP11-114H23.3-001 processed_pseudogene Homo_sapiens 0 318
ENST00000585756 RPL10P15-001 processed_pseudogene Homo_sapiens 0 403
ENST00000618723 RPL10-202 protein_coding Homo_sapiens 0 623

Loading