C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L10, pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121321 Rpl10-ps6-001 ENSMUSG00000080885 10090 - 19:37295155-37295796 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121321
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121321 0.470±0.32 0.321±0.11 10.177±9.74 5.714±5.61 0.335±0.29 0.383±0.12 0.311±0.20 0.186±0.07 6.614±12.71 0.576±0.12 0.102±0.05 0.738±0.30 0.272±0.07 0.401±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VX CIL_0007VX_0002 VISTA 19:37192022-37797349
CIL_00018P CIL_00018P_0002 CGP 19:37207543-37337852
CIL_00018U CIL_00018U_0002 CGP 19:37268743-37421859

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298283 RPL10L-001 protein_coding Homo_sapiens 0 693
ENST00000310599 RP11-209A2.1-001 processed_pseudogene Homo_sapiens 0 682
ENST00000325000 CTD-2192J16.15-001 processed_pseudogene Homo_sapiens 0 835
ENST00000344746 RPL10-001 protein_coding Homo_sapiens 0 841
ENST00000369817 RPL10-008 protein_coding Homo_sapiens 0 841
ENST00000406022 RPL10-011 protein_coding Homo_sapiens 0 806
ENST00000412093 RP11-465N4.2-001 processed_pseudogene Homo_sapiens 0 327
ENST00000424325 RPL10-201 protein_coding Homo_sapiens 0 841
ENST00000427342 RP11-254B13.4-001 processed_pseudogene Homo_sapiens 0 364
ENST00000427682 RPL10-018 protein_coding Homo_sapiens 0 311
ENST00000427719 AC010095.7-001 processed_pseudogene Homo_sapiens 0 671
ENST00000428169 RPL10-020 protein_coding Homo_sapiens 0 311
ENST00000431607 RPL10P3-001 processed_pseudogene Homo_sapiens 0 394
ENST00000436473 RPL10-015 protein_coding Homo_sapiens 0 797
ENST00000447844 RPL10P1-001 processed_pseudogene Homo_sapiens 0 695
ENST00000449494 RPL10-019 protein_coding Homo_sapiens 2e-17 94
ENST00000451365 RPL10-017 protein_coding Homo_sapiens 0 346
ENST00000457497 AC016708.2-001 processed_pseudogene Homo_sapiens 0 409
ENST00000458500 RPL10-009 protein_coding Homo_sapiens 0 425
ENST00000467168 RPL10-012 retained_intron Homo_sapiens 0 643
ENST00000474786 RPL10-004 retained_intron Homo_sapiens 0 427
ENST00000482732 RPL10-003 retained_intron Homo_sapiens 0 202
ENST00000485196 RPL10-010 retained_intron Homo_sapiens 0 675
ENST00000489200 RPL10-006 retained_intron Homo_sapiens 0 300
ENST00000491035 RPL10-005 retained_intron Homo_sapiens 0 427
ENST00000492572 RPL10-013 retained_intron Homo_sapiens 0 427
ENST00000495649 RP11-190C22.1-001 processed_pseudogene Homo_sapiens 0 573
ENST00000509131 CTC-431G16.3-001 processed_pseudogene Homo_sapiens 0 204
ENST00000514065 CTC-498M16.3-001 processed_pseudogene Homo_sapiens 0 230
ENST00000522551 CTC-575D19.1-001 processed_pseudogene Homo_sapiens 0 830
ENST00000522888 RP11-546B8.5-001 processed_pseudogene Homo_sapiens 0 375
ENST00000550757 RP11-114H23.3-001 processed_pseudogene Homo_sapiens 0 318
ENST00000585756 RPL10P15-001 processed_pseudogene Homo_sapiens 0 398
ENST00000618723 RPL10-202 protein_coding Homo_sapiens 0 608

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