C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 18 (vesicular monoamine transporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000298472 SLC18A2-001 ENSG00000165646 9606 + 10:117241093-117279430 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YJ CIL_0007YJ_0001 VISTA 10:116794613-117395732
CIL_0007ZF CIL_0007ZF_0001 VISTA 10:116796186-117397238
CIL_0008H6 CIL_0008H6_0001 VISTA 10:116948553-117549645
CIL_0007KI CIL_0007KI_0001 UCNEbase 10:116961332-118177484
CIL_0004GZ CIL_0004GZ_0002 CGP 10:117197489-117279430
CIL_0008MK CIL_0008MK_0001 VISTA 10:117202873-117804737
CIL_00046Y CIL_00046Y_0002 CGP 10:117241093-117375467

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001975 IEA response to amphetamine
GO:0005275 IEA amine transmembrane transporter activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006836 IEA neurotransmitter transport
GO:0006837 IEA serotonin transport
GO:0007268 TAS synaptic transmission
GO:0007269 TAS neurotransmitter secretion
GO:0007568 IEA aging
GO:0007626 IEA locomotory behavior
GO:0008021 TAS synaptic vesicle
GO:0008144 IEA drug binding
GO:0008504 TAS monoamine transmembrane transporter activity
GO:0009635 IEA response to herbicide
GO:0009636 IEA response to toxic substance
GO:0009791 IEA post-embryonic development
GO:0010038 IEA response to metal ion
GO:0010043 IEA response to zinc ion
GO:0015222 IEA serotonin transmembrane transporter activity
GO:0015844 TAS monoamine transport
GO:0015872 TAS dopamine transport
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0016265 IEA death
GO:0019899 IEA enzyme binding
GO:0022857 IEA transmembrane transporter activity
GO:0030073 IEA insulin secretion
GO:0030672 IEA synaptic vesicle membrane
GO:0031045 IEA dense core granule
GO:0031072 IEA heat shock protein binding
GO:0032456 IEA endocytic recycling
GO:0035690 IEA cellular response to drug
GO:0042137 NAS sequestering of neurotransmitter
GO:0042220 IEA response to cocaine
GO:0042493 IEA response to drug
GO:0042593 IEA glucose homeostasis
GO:0042594 IEA response to starvation
GO:0042995 IEA cell projection
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body
GO:0043195 IEA terminal bouton
GO:0043679 IEA axon terminus
GO:0044297 IEA cell body
GO:0051412 IEA response to corticosterone
GO:0051589 IEA negative regulation of neurotransmitter transport
GO:0055085 TAS:IEA transmembrane transport
GO:0070083 TAS clathrin-sculpted monoamine transport vesicle membrane
GO:0071242 IEA cellular response to ammonium ion
GO:0098700 TAS neurotransmitter loading into synaptic vesicle
GO:1903427 NAS negative regulation of reactive oxygen species biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026084 Slc18a2-201 protein_coding Mus_musculus 0 2209
ENSDART00000025466 slc18a2-001 protein_coding Danio_rerio 0 654

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