C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008MK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm448 VISTA 9606 10:117202873-117804737
GeneTranscriptPositionBiotype
ENSG00000165650 (PDZD8)
PDZ domain containing 8 		ENST00000334464 (PDZD8-001) 117277274-117375467 protein_coding
ENST00000482496 (PDZD8-002) 117284307-117314235 processed_transcript
ENST00000489302 (PDZD8-003) 117285108-117318978 processed_transcript
ENST00000489491 (PDZD8-004) 117290186-117374481 processed_transcript
ENSG00000170370 (EMX2)
empty spiracles homeobox 2 		ENST00000442245 (EMX2-201) 117542445-117549545 protein_coding
ENST00000546446 (EMX2-003) 117544866-117548799 processed_transcript
ENST00000553456 (EMX2-001) 117542444-117549546 protein_coding
ENST00000616794 (EMX2-002) 117543568-117549542 protein_coding
ENSG00000186795 (KCNK18)
potassium channel, subfamily K, member 18 		ENST00000334549 (KCNK18-001) 117197489-117210299 protein_coding
ENSG00000229847 (EMX2OS)
EMX2 opposite strand/antisense RNA 		ENST00000412075 (EMX2OS-005) 117473215-117477173 antisense
ENST00000423419 (EMX2OS-003) 117490649-117494688 antisense
ENST00000424371 (EMX2OS-004) 117473237-117486228 antisense
ENST00000440007 (EMX2OS-001) 117484295-117542495 antisense
ENST00000450314 (EMX2OS-002) 117473215-117542319 antisense
ENST00000551288 (EMX2OS-006) 117484295-117545068 antisense
ENST00000611404 (EMX2OS-007) 117473299-117476919 antisense
ENSG00000234952 (RP11-328K15.1)
 ENST00000445647 (RP11-328K15.1-001) 117735313-117736407 lincRNA
ENSG00000235198 (CTA-109P11.1)
 ENST00000450247 (CTA-109P11.1-001) 117562084-117572457 lincRNA
ENSG00000277879 (RP11-129M16.4)
 ENST00000614747 (RP11-129M16.4-001) 117267116-117268668 antisense

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0008MK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm448 VISTA 10090 19:59123214-59725570
GeneTranscriptPositionBiotype
ENSMUSG00000006270 (Vax1)
ventral anterior homeobox 1 		ENSMUST00000172821 (Vax1-001) 59166187-59170056 protein_coding
ENSMUST00000173710 (Vax1-004) 59166598-59166980 processed_transcript
ENSMUSG00000025094 (Slc18a2)
solute carrier family 18 (vesicular monoamine), member 2 		ENSMUST00000026084 (Slc18a2-201) 59260878-59296012 protein_coding
ENSMUSG00000040901 (Kcnk18)
potassium channel, subfamily K, member 18 		ENSMUST00000065204 (Kcnk18-201) 59219648-59237370 protein_coding
ENSMUSG00000043969 (Emx2)
empty spiracles homeobox 2 		ENSMUST00000062216 (Emx2-001) 59458372-59465357 protein_coding
ENSMUST00000174353 (Emx2-002) 59459519-59465353 protein_coding
ENSMUST00000174573 (Emx2-003) 59462802-59464215 processed_transcript
ENSMUSG00000067038 (Rps12-ps3)
ribosomal protein S12, pseudogene 3 		ENSMUST00000086764 (Rps12-ps3-201) 59322290-59322783 protein_coding
ENSMUSG00000074746 (Pdzd8)
PDZ domain containing 8 		ENSMUST00000099274 (Pdzd8-201) 59296084-59345780 protein_coding
ENSMUSG00000087095 (Emx2os)
Emx2 opposite strand/antisense transcript (non-protein coding) 		ENSMUST00000136990 (Emx2os-001) 59425104-59458635 antisense
ENSMUSG00000100119 (RP23-103C10.3)
RIKEN cDNA 2700089I24 gene 		ENSMUST00000190204 (RP23-103C10.3-001) 59493136-59559391 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008MK_0001ENSG00000165650ENST00000334464ENST00000482496ENST00000489302ENST00000489491ENSG00000170370ENST00000442245ENST00000546446ENST00000553456ENST00000616794ENSG00000186795ENST00000334549ENSG00000229847ENST00000412075ENST00000423419ENST00000424371ENST00000440007ENST00000450314ENST00000551288ENST00000611404ENSG00000234952ENST00000445647ENSG00000235198ENST00000450247ENSG00000277879ENST00000614747CIL_0008MK_0002ENSMUSG00000006270ENSMUST00000172821ENSMUST00000173710ENSMUSG00000025094ENSMUST00000026084ENSMUSG00000040901ENSMUST00000065204ENSMUSG00000043969ENSMUST00000062216ENSMUST00000174353ENSMUST00000174573ENSMUSG00000067038ENSMUST00000086764ENSMUSG00000074746ENSMUST00000099274ENSMUSG00000087095ENSMUST00000136990ENSMUSG00000100119ENSMUST00000190204
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008MK_0001ENSG00000165650ENST00000334464ENST00000482496ENST00000489302ENSG00000170370ENST00000442245ENST00000546446ENST00000553456ENST00000616794ENSG00000186795ENST00000334549ENSG00000229847ENST00000412075ENST00000423419ENST00000440007ENST00000551288ENSG00000234952ENST00000445647ENSG00000235198ENST00000450247ENSG00000277879ENST00000614747CIL_0008MK_0002ENSMUSG00000006270ENSMUST00000172821ENSMUST00000173710ENSMUSG00000025094ENSMUST00000026084ENSMUSG00000040901ENSMUST00000065204ENSMUSG00000043969ENSMUST00000062216ENSMUST00000174353ENSMUST00000174573ENSMUSG00000067038ENSMUST00000086764ENSMUSG00000074746ENSMUST00000099274ENSMUSG00000087095ENSMUST00000136990ENSMUSG00000100119ENSMUST00000190204
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165650 ENST00000334464 6.517±0.00 2.384±0.00 2.129±0.00 6.354±2.65 2.889±0.25 4.614±0.10 2.208±0.88 5.599±0.75 4.074±0.98 3.640±0.47 1.441±0.71 8.551±4.37 1.958±0.45 9.228±2.76
ENST00000482496 N/A N/A N/A N/A N/A N/A 1.878±0.00 N/A N/A N/A N/A 16.091±0.00 N/A 13.693±0.00
ENST00000489302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 33.940±0.00
ENST00000489491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170370 ENST00000442245 N/A N/A N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A
ENST00000546446 N/A 1.331±0.00 N/A 18.218±0.00 0.146±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553456 4.239±0.00 N/A 1.935±0.00 4.454±3.72 2.708±0.00 N/A 0.184±0.00 35.855±0.00 N/A 0.080±0.00 0.581±0.00 4.394±1.96 0.399±0.16 5.352±4.45
ENST00000616794 5.133±0.00 0.765±0.00 N/A 12.856±0.00 N/A N/A N/A N/A N/A N/A N/A 7.240±2.79 0.723±0.35 10.069±0.00
ENSG00000186795 ENST00000334549 N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A 0.045±0.03
ENSG00000229847 ENST00000412075 N/A N/A N/A N/A 0.294±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423419 N/A N/A N/A N/A N/A 0.336±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000440007 2.266±0.00 0.939±0.00 1.410±0.00 5.260±3.80 2.020±0.00 0.300±0.28 0.097±0.07 28.252±0.00 0.114±0.09 0.065±0.00 0.479±0.00 4.726±4.35 0.624±0.41 3.503±2.41
ENST00000450314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551288 N/A N/A N/A N/A N/A N/A N/A N/A 0.254±0.00 N/A N/A N/A N/A N/A
ENST00000611404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234952 ENST00000445647 N/A N/A N/A 0.070±0.00 0.135±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.049±0.14
ENSG00000235198 ENST00000450247 N/A N/A N/A N/A N/A N/A N/A 0.290±0.00 N/A N/A N/A 0.300±0.00 N/A N/A
ENSG00000277879 ENST00000614747 N/A N/A N/A N/A 4.173±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006270 ENSMUST00000172821 0.028±0.00 0.073±0.02 0.012±0.00 3.772±2.46 N/A N/A N/A 0.038±0.00 0.014±0.00 0.029±0.00 0.122±0.00 0.063±0.01 0.070±0.05 0.236±0.09
ENSMUST00000173710 0.587±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.345±0.26 0.616±0.00
ENSMUSG00000025094 ENSMUST00000026084 0.171±0.08 6.646±3.78 0.482±0.00 9.610±6.17 0.628±0.35 1.350±0.85 0.487±0.15 0.833±0.38 0.698±0.63 0.383±0.18 0.414±0.05 42.011±20.23 1.209±0.59 0.234±0.21
ENSMUSG00000040901 ENSMUST00000065204 0.010±0.00 0.017±0.00 0.014±0.01 0.016±0.00 N/A N/A N/A 0.026±0.01 0.005±0.00 N/A 0.021±0.00 0.406±0.20 0.203±0.30 0.039±0.01
ENSMUSG00000043969 ENSMUST00000062216 5.727±5.22 0.116±0.03 0.075±0.03 5.112±3.47 2.154±1.56 0.017±0.00 N/A 10.381±3.56 0.024±0.01 0.011±0.00 0.105±0.09 18.115±9.29 0.239±0.32 1.036±0.55
ENSMUST00000174353 N/A N/A N/A 1.983±0.00 N/A N/A N/A N/A 0.021±0.01 N/A 0.048±0.01 9.369±0.00 0.120±0.05 3.113±0.00
ENSMUST00000174573 N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.02 N/A N/A N/A N/A N/A
ENSMUSG00000067038 ENSMUST00000086764 17.676±2.76 116.816±24.91 37.911±5.98 20.617±6.13 13.290±6.56 44.967±34.57 11.130±6.25 31.308±13.76 72.039±46.91 17.780±1.35 11.229±0.90 135.816±51.67 150.586±233.91 28.481±5.98
ENSMUSG00000074746 ENSMUST00000099274 4.347±1.76 11.922±1.53 4.177±0.56 6.652±1.61 5.223±3.50 8.379±2.65 2.063±0.16 3.404±0.85 3.348±0.51 8.691±1.79 1.602±0.12 11.423±4.09 6.235±1.22 22.074±8.44
ENSMUSG00000087095 ENSMUST00000136990 1.040±0.78 0.027±0.02 0.032±0.01 0.683±0.40 0.250±0.01 N/A 0.011±0.01 0.711±0.10 0.005±0.00 0.023±0.01 0.047±0.02 1.099±0.60 0.038±0.04 N/A
ENSMUSG00000100119 ENSMUST00000190204 N/A N/A N/A 0.017±0.00 N/A N/A N/A 0.017±0.00 N/A N/A N/A 0.041±0.02 N/A 0.068±0.03

Loading