C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynactin 5 (p25)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000300087 DCTN5-001 ENSG00000166847 9606 + 16:23641392-23677455 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000300087
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000300087 0.800±0.00 1.042±0.00 1.080±0.00 5.902±0.87 1.793±0.11 1.819±0.00 0.492±0.06 2.266±0.00 0.669±0.31 0.633±0.07 1.723±1.04 1.657±0.34 3.407±1.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D1 CIL_0006D1_0001 CGP 16:23603160-23677455
CIL_0006D0 CIL_0006D0_0001 CGP 16:23641392-23690367

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0019886 TAS antigen processing and presentation of exogenous peptide antigen via MHC class II

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033156 Dctn5-001 protein_coding Mus_musculus 0 833
ENSMUST00000123602 Dctn5-002 retained_intron Mus_musculus 0 750
ENSMUST00000119487 Gm15573-001 processed_pseudogene Mus_musculus 0 641

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