C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | post-GPI attachment to proteins 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000300658  |
PGAP3-001 |
ENSG00000161395 |
9606 | - |
17:39671122-39688107  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008SN | CIL_0008SN_0001 | VISTA | 17:39110111-39710718 |
| CIL_00080Z | CIL_00080Z_0001 | VISTA | 17:39318232-39918735 |
| CIL_00098W | CIL_00098W_0001 | VISTA | 17:39359510-39962707 |
| CIL_0007WH | CIL_0007WH_0001 | VISTA | 17:39374871-39978277 |
| CIL_0002PP | CIL_0002PP_0001 | CGP | 17:39667981-39696797 |
| CIL_0002PO | CIL_0002PO_0001 | CGP | 17:39671122-39730426 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005794 | IEA | Golgi apparatus |
| GO:0006505 | IMP | GPI anchor metabolic process |
| GO:0006506 | IEA | GPI anchor biosynthetic process |
| GO:0016021 | IEA | integral component of membrane |
| GO:0016788 | IMP | hydrolase activity, acting on ester bonds |
| GO:0031227 | IDA | intrinsic component of endoplasmic reticulum membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000090827
|
Pgap3-001 | protein_coding | Mus_musculus | 0 | 1061 |
|
ENSMUST00000128058
|
Pgap3-004 | processed_transcript | Mus_musculus | 0 | 558 |
|
ENSMUST00000128897
|
Pgap3-005 | protein_coding | Mus_musculus | 0 | 279 |
|
ENSMUST00000125348
|
Pgap3-003 | processed_transcript | Mus_musculus | 0 | 279 |
