C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GABA(A) receptor-associated protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000302386 GABARAP-001 ENSG00000170296 9606 - 17:7240014-7242770 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000302386
Transcript ID Ovary
ENST00000302386 55.665±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000045 IEA autophagic vacuole assembly
GO:0000226 IEA microtubule cytoskeleton organization
GO:0000421 IDA autophagic vacuole membrane
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005764 IEA lysosome
GO:0005776 IDA autophagic vacuole
GO:0005790 IEA smooth endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005874 IEA microtubule
GO:0005875 IEA microtubule associated complex
GO:0005886 IEA plasma membrane
GO:0005930 ISS axoneme
GO:0006605 TAS protein targeting
GO:0006914 IEA autophagy
GO:0007268 TAS synaptic transmission
GO:0008017 IEA microtubule binding
GO:0008625 IDA extrinsic apoptotic signaling pathway via death domain receptors
GO:0015031 IEA protein transport
GO:0015629 IEA actin cytoskeleton
GO:0031410 IEA cytoplasmic vesicle
GO:0044297 IEA cell body
GO:0048471 IEA perinuclear region of cytoplasm
GO:0048487 IDA beta-tubulin binding
GO:0050811 IPI GABA receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018711 Gabarap-001 protein_coding Mus_musculus 0 1103
ENSMUST00000144443 Gabarap-002 retained_intron Mus_musculus 0 630
ENSMUST00000108592 Gabarap-004 protein_coding Mus_musculus 0 479
ENSMUST00000139007 Gabarap-003 processed_transcript Mus_musculus 2e-36 158

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