C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000303538 PDS5A-001 ENSG00000121892 9606 - 4:39822863-39977956 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303538
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303538 6.118±0.00 3.071±0.00 5.415±0.00 2.355±1.76 8.567±1.68 8.393±2.81 4.937±1.64 8.860±1.85 6.676±3.31 6.755±0.25 6.877±0.00 8.807±3.55 4.226±0.53 4.439±2.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TZ CIL_0002TZ_0002 CGP 4:39698044-39977956
CIL_0002TY CIL_0002TY_0002 CGP 4:39822863-40158252

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000775 TAS chromosome, centromeric region
GO:0000785 IDA chromatin
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005694 TAS chromosome
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0007064 IPI mitotic sister chromatid cohesion
GO:0008156 IMP negative regulation of DNA replication

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031104 Pds5a-201 protein_coding Mus_musculus 0 5662

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