C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H1e
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062045 Hist1h1e-001 ENSMUSG00000051627 10090 - 13:23621755-23622502 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062045
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062045 1.661±0.34 0.746±0.27 1.169±0.58 3.241±2.23 1.093±0.23 2.081±0.83 0.703±0.21 1.070±0.14 7.224±8.01 1.772±0.30 2.697±0.65 1.102±0.58 3.113±3.71 0.457±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LM CIL_0000LM_0004 CGP 13:23583742-23622502
CIL_0000LN CIL_0000LN_0003 CGP 13:23621755-23683924

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005720 IEA nuclear heterochromatin
GO:0006334 IEA nucleosome assembly
GO:0016584 IMP nucleosome positioning
GO:0031490 IEA chromatin DNA binding
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304218 HIST1H1E-001 protein_coding Homo_sapiens 0 713
ENST00000369163 HIST1H3H-001 protein_coding Homo_sapiens 0.000006 57
ENST00000620438 HIST3H2BB-001 protein_coding Homo_sapiens 0.000003 58

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