C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304734 RPL7L1-001 ENSG00000146223 9606 + 6:42879682-42889925 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverLungMuscleOvaryPlacentaENST00000304734
Transcript ID Adipose Adrenal Brain Breast Heart Liver Lung Muscle Ovary Placenta
ENST00000304734 3.464±0.00 6.516±0.00 4.210±0.00 4.507±0.00 2.961±0.00 7.276±0.00 1.810±0.00 2.086±0.00 5.257±3.21 5.925±0.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005840 IEA ribosome
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078286 Rpl7l1-201 protein_coding Mus_musculus 0 763
ENSMUST00000118660 Gm12099-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000119005 Gm11222-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000187707 1700084J12Rik-002 processed_transcript Mus_musculus 0 675
ENSMUST00000079057 1700084J12Rik-001 transcribed_processed_pseudogene Mus_musculus 0 647
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000001 60
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000005 58
ENSMUST00000168162 Pdgfra-202 protein_coding Mus_musculus 0.00007 55
ENSMUST00000000476 Pdgfra-201 protein_coding Mus_musculus 0.00007 55

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