C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11222
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119005 Gm11222-001 ENSMUSG00000085627 10090 + 4:69853947-69854684 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverPlacentaTestisENSMUST00000119005
Transcript ID Brain Kidney Liver Placenta Testis
ENSMUST00000119005 0.254±0.31 0.073±0.00 0.041±0.04 0.895±0.82 0.118±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FK CIL_0004FK_0002 CGP 4:68761514-70410443

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304734 RPL7L1-001 protein_coding Homo_sapiens 0 689
ENST00000397415 RPL7L1-002 processed_transcript Homo_sapiens 0 538
ENST00000405921 RP1-290I10.2-001 processed_pseudogene Homo_sapiens 0 390
ENST00000417594 RPL7L1P12-001 processed_pseudogene Homo_sapiens 0 484
ENST00000423238 RPL7P57-001 processed_pseudogene Homo_sapiens 0 573
ENST00000425129 RPL7P46-001 processed_pseudogene Homo_sapiens 0 610
ENST00000431298 RPL7L1P9-001 processed_pseudogene Homo_sapiens 0 527
ENST00000437739 RPL7P28-001 processed_pseudogene Homo_sapiens 0 523
ENST00000446092 RPL7L1P11-001 processed_pseudogene Homo_sapiens 0 520
ENST00000446889 RPL7L1P2-001 processed_pseudogene Homo_sapiens 0 518
ENST00000449851 RPL7P14-001 processed_pseudogene Homo_sapiens 0 534
ENST00000455249 RPL7L1P3-001 processed_pseudogene Homo_sapiens 0 207
ENST00000462348 RPL7L1-008 processed_transcript Homo_sapiens 0 300
ENST00000466005 RPL7P22-001 processed_pseudogene Homo_sapiens 0 579
ENST00000469911 RPL7L1P8-001 processed_pseudogene Homo_sapiens 0 518
ENST00000478287 RPL7P21-001 processed_pseudogene Homo_sapiens 0 505
ENST00000483998 RPL7L1-005 processed_transcript Homo_sapiens 0 538
ENST00000492836 RPL7L1-007 processed_transcript Homo_sapiens 8e-36 154
ENST00000493763 RPL7L1-003 protein_coding Homo_sapiens 0 689
ENST00000497417 RPL7L1-004 retained_intron Homo_sapiens 2e-38 165
ENST00000509986 RPL7L1P7-001 processed_pseudogene Homo_sapiens 0 374
ENST00000511702 RPL7L1P13-001 processed_pseudogene Homo_sapiens 0 488
ENST00000511857 RP11-15B17.2-001 processed_pseudogene Homo_sapiens 0 601
ENST00000513004 RPL7L1P4-001 processed_pseudogene Homo_sapiens 0 394
ENST00000560719 RP11-621H8.1-001 processed_pseudogene Homo_sapiens 0 340
ENST00000569728 AC002310.10-001 unprocessed_pseudogene Homo_sapiens 0 444
ENST00000572039 RP11-433P17.1-001 processed_pseudogene Homo_sapiens 0 534
ENST00000590816 RPL7L1P5-001 processed_pseudogene Homo_sapiens 0 510
ENST00000602561 RPL7L1-010 protein_coding Homo_sapiens 0 479

Loading