C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box D4-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000306507 FOXD4L1-001 ENSG00000184492 9606 + 2:113498665-113501155 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306507
Transcript ID Adipose Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306507 0.028±0.00 0.028±0.00 0.051±0.00 0.029±0.00 0.034±0.02 0.084±0.00 0.029±0.01 0.023±0.00 0.072±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038H CIL_00038H_0002 CGP 2:113437691-113501155

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058600 Foxd4-201 protein_coding Mus_musculus 0 584
ENSMUST00000087285 Foxd3-001 protein_coding Mus_musculus 0 342
ENSMUST00000105098 Foxd1-001 protein_coding Mus_musculus 0 315
ENSDART00000077753 foxc1b-001 protein_coding Danio_rerio 0.0002 53

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