C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleic acid binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307834 NABP1-003 ENSG00000173559 9606 + 2:191678127-191686939 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyLungOvaryPlacentaTestisENST00000307834
Transcript ID Adipose Breast Kidney Lung Ovary Placenta Testis
ENST00000307834 2.052±0.00 4.719±0.00 2.604±0.00 6.560±0.00 2.241±0.00 1.093±0.00 2.499±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042N CIL_00042N_0002 CGP 2:191678068-191847255

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000185534 Nabp1-008 protein_coding Mus_musculus 0 350
ENSMUST00000188051 Nabp1-007 protein_coding Mus_musculus 0 318
ENSMUST00000188204 Nabp1-009 protein_coding Mus_musculus 0 318
ENSMUST00000186684 Nabp1-005 protein_coding Mus_musculus 0 318
ENSMUST00000027279 Nabp1-001 protein_coding Mus_musculus 0 318
ENSMUST00000190103 Nabp1-002 nonsense_mediated_decay Mus_musculus 0 318
ENSMUST00000186003 Nabp1-006 nonsense_mediated_decay Mus_musculus 0 318
ENSMUST00000189542 Nabp1-003 nonsense_mediated_decay Mus_musculus 0 318
ENSMUST00000188303 Nabp1-004 retained_intron Mus_musculus 0 213

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