C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000308091  |
RAPH1-002 |
ENSG00000173166 |
9606 | - |
2:203441470-203535335  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000JP | CIL_0000JP_0002 | CGP | 2:203238449-203447723 |
| CIL_0000JQ | CIL_0000JQ_0002 | CGP | 2:203328219-203535410 |
| CIL_0001QX | CIL_0001QX_0001 | CGP | 2:203394345-203738912 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IEA | cytoplasm |
| GO:0005856 | IEA | cytoskeleton |
| GO:0005886 | IEA | plasma membrane |
| GO:0007160 | IEA | cell-matrix adhesion |
| GO:0007165 | IEA | signal transduction |
| GO:0042995 | IEA | cell projection |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000090293
|
Raph1-003 | protein_coding | Mus_musculus | 0 | 2878 |
|
ENSMUST00000027168
|
Raph1-201 | protein_coding | Mus_musculus | 0 | 2645 |
|
ENSMUST00000140485
|
Raph1-001 | protein_coding | Mus_musculus | 0 | 1439 |
|
ENSMUST00000142258
|
Raph1-004 | protein_coding | Mus_musculus | 0 | 771 |
|
ENSMUST00000182085
|
Raph1-005 | protein_coding | Mus_musculus | 0 | 713 |
|
ENSMUST00000188511
|
Raph1-002 | retained_intron | Mus_musculus | 0 | 418 |
|
ENSMUST00000189383
|
Raph1-006 | retained_intron | Mus_musculus | 0 | 200 |
