C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001QX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000173166-ENSG00000178562 CGP 9606 2:203394345-203738912
GeneTranscriptPositionBiotype
ENSG00000138443 (ABI2)
abl-interactor 2 		ENST00000261016 (ABI2-201) 203328239-203432172 protein_coding
ENST00000261017 (ABI2-002) 203328280-203432173 protein_coding
ENST00000261018 (ABI2-202) 203328239-203432172 protein_coding
ENST00000295851 (ABI2-001) 203328219-203447723 protein_coding
ENST00000376135 (ABI2-015) 203328459-203383296 processed_transcript
ENST00000411547 (ABI2-016) 203380226-203402677 processed_transcript
ENST00000413635 (ABI2-011) 203328395-203376132 nonsense_mediated_decay
ENST00000416001 (ABI2-003) 203328391-203427569 nonsense_mediated_decay
ENST00000416396 (ABI2-021) 203394748-203427219 processed_transcript
ENST00000417864 (ABI2-006) 203328407-203427269 protein_coding
ENST00000422511 (ABI2-007) 203328484-203428596 protein_coding
ENST00000422719 (ABI2-017) 203380358-203416972 processed_transcript
ENST00000424558 (ABI2-005) 203328395-203427948 protein_coding
ENST00000425253 (ABI2-023) 203328394-203366957 nonsense_mediated_decay
ENST00000430418 (ABI2-004) 203328392-203427528 protein_coding
ENST00000430574 (ABI2-019) 203380275-203416983 processed_transcript
ENST00000431886 (ABI2-013) 203328399-203380277 nonsense_mediated_decay
ENST00000441061 (ABI2-008) 203328336-203427528 nonsense_mediated_decay
ENST00000444584 (ABI2-014) 203328405-203380273 nonsense_mediated_decay
ENST00000447762 (ABI2-024) 203328282-203380306 nonsense_mediated_decay
ENST00000451591 (ABI2-018) 203380308-203402734 protein_coding
ENST00000454023 (ABI2-020) 203391044-203427411 protein_coding
ENST00000464761 (ABI2-022) 203402706-203436883 processed_transcript
ENST00000494215 (ABI2-012) 203328458-203367419 retained_intron
ENSG00000178562 (CD28)
CD28 molecule 		ENST00000324106 (CD28-001) 203706548-203738912 protein_coding
ENST00000374481 (CD28-201) 203706475-203738910 protein_coding
ENST00000458610 (CD28-002) 203706524-203734912 protein_coding
ENSG00000233031 (AC125238.3)
 ENST00000448842 (AC125238.3-001) 203672175-203672423 processed_pseudogene
ENSG00000233459 (AC125238.2)
 ENST00000430003 (AC125238.2-001) 203634577-203636016 processed_pseudogene
CIL_0001QX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026014-ENSMUSG00000026012 CGP 10090 1:60482292-60773359
GeneTranscriptPositionBiotype
ENSMUSG00000026012 (Cd28)
CD28 antigen 		ENSMUST00000027165 (Cd28-001) 60746358-60773359 protein_coding
ENSMUST00000132833 (Cd28-003) 60716800-60763163 processed_transcript
ENSMUST00000153207 (Cd28-002) 60746402-60764626 retained_intron
ENSMUSG00000026014 (Raph1)
Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 		ENSMUST00000027168 (Raph1-201) 60483236-60566765 protein_coding
ENSMUST00000090293 (Raph1-003) 60490676-60566769 protein_coding
ENSMUST00000127573 (Raph1-007) 60513809-60522291 retained_intron
ENSMUST00000140485 (Raph1-001) 60482292-60566779 protein_coding
ENSMUST00000142258 (Raph1-004) 60525688-60567104 protein_coding
ENSMUST00000182085 (Raph1-005) 60483185-60499550 protein_coding
ENSMUST00000188511 (Raph1-002) 60493323-60496281 retained_intron
ENSMUST00000189383 (Raph1-006) 60501603-60503265 retained_intron
ENSMUSG00000081562 (Gm11575)
predicted gene 11575 		ENSMUST00000122243 (Gm11575-001) 60522839-60523066 processed_pseudogene
ENSMUSG00000082160 (Gm11578)
predicted gene 11578 		ENSMUST00000118530 (Gm11578-001) 60592251-60592709 processed_pseudogene
ENSMUSG00000082209 (Eif4a-ps4)
 ENSMUST00000178619 (Eif4a-ps4-201) 60703918-60705656 pseudogene
ENSMUSG00000084400 (Gm11576)
predicted gene 11576 		ENSMUST00000117433 (Gm11576-001) 60537020-60537436 processed_pseudogene
ENSMUSG00000101188 (Eif4a-ps4)
eukaryotic translation initiation factor 4A, pseudogene 4 		ENSMUST00000122226 (Eif4a-ps4-001) 60703932-60705149 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QX_0001ENSG00000138443ENST00000261016ENST00000261017ENST00000261018ENST00000295851ENST00000376135ENST00000411547ENST00000413635ENST00000416001ENST00000416396ENST00000417864ENST00000422511ENST00000422719ENST00000424558ENST00000425253ENST00000430418ENST00000430574ENST00000431886ENST00000441061ENST00000444584ENST00000447762ENST00000451591ENST00000454023ENST00000464761ENST00000494215ENSG00000178562ENST00000324106ENST00000374481ENST00000458610ENSG00000233031ENST00000448842ENSG00000233459ENST00000430003CIL_0001QX_0002ENSMUSG00000026012ENSMUST00000027165ENSMUST00000132833ENSMUST00000153207ENSMUSG00000026014ENSMUST00000027168ENSMUST00000090293ENSMUST00000127573ENSMUST00000140485ENSMUST00000142258ENSMUST00000182085ENSMUST00000188511ENSMUST00000189383ENSMUSG00000081562ENSMUST00000122243ENSMUSG00000082160ENSMUST00000118530ENSMUSG00000082209ENSMUST00000178619ENSMUSG00000084400ENSMUST00000117433ENSMUSG00000101188ENSMUST00000122226
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001QX_0001ENSG00000138443ENST00000261016ENST00000261017ENST00000261018ENST00000416001ENSG00000178562ENST00000324106ENST00000374481ENST00000458610ENSG00000233031ENST00000448842ENSG00000233459ENST00000430003CIL_0001QX_0002ENSMUSG00000026012ENSMUST00000027165ENSMUST00000132833ENSMUST00000153207ENSMUSG00000026014ENSMUST00000027168ENSMUST00000090293ENSMUST00000140485ENSMUST00000182085ENSMUSG00000081562ENSMUST00000122243ENSMUSG00000082160ENSMUST00000118530ENSMUSG00000082209ENSMUST00000178619ENSMUSG00000084400ENSMUST00000117433ENSMUSG00000101188ENSMUST00000122226
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138443 ENST00000261016 N/A N/A 1.534±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000261017 4.804±0.00 4.399±0.00 2.543±0.00 6.425±1.38 4.414±0.30 5.052±2.59 3.297±1.46 8.190±0.00 6.170±0.00 6.081±0.68 1.107±0.26 7.421±3.65 4.086±0.21 8.980±1.79
ENST00000261018 N/A N/A N/A 15.040±2.57 N/A N/A 3.496±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000295851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000411547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.616±0.00
ENST00000416396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000178562 ENST00000324106 0.266±0.00 1.732±0.00 N/A 0.043±0.00 N/A N/A 0.010±0.00 N/A N/A 1.405±0.00 N/A 0.210±0.10 2.452±0.47 N/A
ENST00000374481 N/A N/A N/A N/A N/A 0.094±0.00 N/A 0.176±0.00 N/A 0.389±0.00 0.024±0.00 0.280±0.00 0.703±0.00 0.247±0.13
ENST00000458610 N/A N/A N/A N/A N/A N/A N/A 0.683±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000233031 ENST00000448842 N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233459 ENST00000430003 N/A N/A N/A N/A 0.039±0.00 N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A 0.032±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026012 ENSMUST00000027165 0.222±0.03 0.161±0.12 0.283±0.07 0.026±0.01 3.012±1.06 0.441±0.09 0.644±0.10 0.171±0.13 0.059±0.02 0.534±0.11 0.764±0.23 0.190±0.09 0.077±0.04 0.041±0.04
ENSMUST00000132833 N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000153207 N/A N/A N/A N/A N/A 0.284±0.00 N/A N/A 0.107±0.03 N/A N/A 0.137±0.04 N/A N/A
ENSMUSG00000026014 ENSMUST00000027168 N/A N/A N/A N/A N/A N/A N/A N/A 4.660±0.00 N/A N/A 2.081±0.11 N/A N/A
ENSMUST00000090293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.743±0.00 N/A N/A
ENSMUST00000127573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140485 2.729±0.24 3.248±1.58 2.291±0.62 6.018±3.49 1.227±0.45 4.182±0.87 1.969±0.95 1.269±0.48 2.901±1.44 6.652±0.95 0.376±0.07 1.343±0.48 3.111±1.81 0.434±0.11
ENSMUST00000142258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.690±0.00 15.341±0.00 N/A
ENSMUST00000188511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081562 ENSMUST00000122243 N/A N/A 0.244±0.05 0.623±0.14 N/A N/A N/A N/A N/A 0.785±0.00 0.421±0.00 0.828±0.00 0.902±0.07 N/A
ENSMUSG00000082160 ENSMUST00000118530 N/A N/A 0.360±0.07 1.247±0.03 N/A N/A 0.107±0.00 0.107±0.00 0.043±0.02 N/A N/A N/A 0.016±0.00 0.179±0.06
ENSMUSG00000082209 ENSMUST00000178619 N/A N/A 7.184±0.03 4.970±2.89 0.283±0.00 0.315±0.00 0.279±0.00 0.489±0.00 7.764±5.89 N/A 0.193±0.11 0.530±0.68 0.306±0.22 0.313±0.10
ENSMUSG00000084400 ENSMUST00000117433 0.132±0.00 N/A 0.031±0.00 0.241±0.00 N/A 0.560±0.00 0.177±0.06 N/A 0.190±0.02 0.308±0.10 N/A 0.592±0.50 N/A 0.110±0.00
ENSMUSG00000101188 ENSMUST00000122226 13.929±1.30 5.217±1.34 8.868±3.83 16.163±3.49 4.757±0.97 3.616±1.49 2.787±0.18 4.071±0.74 15.161±9.45 3.857±1.10 0.657±0.22 14.532±7.26 3.758±2.27 3.181±0.39

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